Click here to switch to the map view.

The map label for this gene is 45656821

Identifier: 45656821

GI number: 45656821

Start: 1125582

End: 1125983

Strand: Reverse

Name: 45656821

Synonym: LIC10933

Alternate gene names: NA

Gene position: 1125983-1125582 (Counterclockwise)

Preceding gene: 45656823

Following gene: 45656820

Centisome position: 26.33

GC content: 38.81

Gene sequence:

>402_bases
TTGATTCTAAAATCCTATTCAACTTGTGGGGTTGGTTATGGTAAAGGGATCGATCCAATCCATCCAAAAAATAAAGGAGG
AGGCTCTACCTTGGCTAAAACAAAGAATCGGCGAGTAGTATTCCTACCGATCAAACCGGAGTTTGCTCATAAAATCATCA
ATGGGGAAAAGAATATAGAGTTTCGAAAGAAGTTCTCTTCCCAAGAAGTTGAAACCATTGTGATCTACTCTTCCAGTCCC
GAAAAGCGAGTCATTGGTTATGCAACTGTCGATTCCATCGTAATCGATACTCCTGATTCTCCTGGAAACGCTTCTATAAA
AAAGGGGGAATCGATAAGGATAGGTTTTCTTTTTATTTTAATGGAAAGGAAACGGGAGTTGGTATTCGAATTAAGAATGT
AA

Upstream 100 bases:

>100_bases
TTGCAAGTAGAAAGACTCATTCTTGTCGGAACACTTGAAAAATGTGCCTTTTTGAGCCCAGAACGGCGATCCATAGAAAG
CCCGTTCTGTTGAGTTCATT

Downstream 100 bases:

>100_bases
GTAGATTGAAAGAGGCTGTTACCCCTACTCAGTTGGGAATCCAAGGAGCGATTCCGCAGAACTTTAAGTTTTTGGAAAAA
GGGATTATTACGATATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MILKSYSTCGVGYGKGIDPIHPKNKGGGSTLAKTKNRRVVFLPIKPEFAHKIINGEKNIEFRKKFSSQEVETIVIYSSSP
EKRVIGYATVDSIVIDTPDSPGNASIKKGESIRIGFLFILMERKRELVFELRM

Sequences:

>Translated_133_residues
MILKSYSTCGVGYGKGIDPIHPKNKGGGSTLAKTKNRRVVFLPIKPEFAHKIINGEKNIEFRKKFSSQEVETIVIYSSSP
EKRVIGYATVDSIVIDTPDSPGNASIKKGESIRIGFLFILMERKRELVFELRM
>Mature_133_residues
MILKSYSTCGVGYGKGIDPIHPKNKGGGSTLAKTKNRRVVFLPIKPEFAHKIINGEKNIEFRKKFSSQEVETIVIYSSSP
EKRVIGYATVDSIVIDTPDSPGNASIKKGESIRIGFLFILMERKRELVFELRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14890; Mature: 14890

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKSYSTCGVGYGKGIDPIHPKNKGGGSTLAKTKNRRVVFLPIKPEFAHKIINGEKNIE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCH
FRKKFSSQEVETIVIYSSSPEKRVIGYATVDSIVIDTPDSPGNASIKKGESIRIGFLFIL
HHHHCCCCCEEEEEEECCCCCCEEEEEEEECEEEEECCCCCCCCCCCCCCEEEEEEEEEE
MERKRELVFELRM
EHHHHCEEEEECC
>Mature Secondary Structure
MILKSYSTCGVGYGKGIDPIHPKNKGGGSTLAKTKNRRVVFLPIKPEFAHKIINGEKNIE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHHHCCCCCCH
FRKKFSSQEVETIVIYSSSPEKRVIGYATVDSIVIDTPDSPGNASIKKGESIRIGFLFIL
HHHHCCCCCEEEEEEECCCCCCEEEEEEEECEEEEECCCCCCCCCCCCCCEEEEEEEEEE
MERKRELVFELRM
EHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA