Click here to switch to the map view.

The map label for this gene is 45656781

Identifier: 45656781

GI number: 45656781

Start: 1074549

End: 1074959

Strand: Reverse

Name: 45656781

Synonym: LIC10890

Alternate gene names: NA

Gene position: 1074959-1074549 (Counterclockwise)

Preceding gene: 45656782

Following gene: 45656780

Centisome position: 25.13

GC content: 38.2

Gene sequence:

>411_bases
ATGAGTTTAAAAAAGAAAAAAAATCCACCTTCGATTCCGGTTAGTTCTATGGCCGACATCGCATTTTTACTTTTGGTTTT
TTTTATGGTAACTTCCGTTTTAGATACAGATCCGGATCTACCAATTGCTCTTCCAGACGTTCCAGGCGGAGAACAGTTAA
ATAAAAAAATAGCAAACCTGTATCTCGGCACGGATAAAGCGGTATATTTCAATCAAGTAAGAATGCCTTTGAACGAAGCG
ATCAATCACGTAAGAGCCAAACTTACCACTACTCCCGATCTTAAAGTTCTGATCCACGCAGATAAAAATTTACCTTATGC
AGAACTAGACAATACATTCGAACTTTTGAAAGAAGCAGGAGCATTGAAAATATCCCTCGTTACAAAAACCACTCAAGGTG
GAGGTCTTTGA

Upstream 100 bases:

>100_bases
AAACGACCGGAGATACAAAATACGGTAACATGTTAGACGCGTTATCCGCCGTTCAAATTCGAGGATTTAAACAGGTCTCC
GTAAAAAGGCTGAAATAAAT

Downstream 100 bases:

>100_bases
TCGATGGAACAACCTAACTCTACAATTACCATCGTGAAAAAGAACAGGCTCAGAAGATGGATTGATCGTTATCGGATGGA
ATTTTTTCTTTCCGTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSLKKKKNPPSIPVSSMADIAFLLLVFFMVTSVLDTDPDLPIALPDVPGGEQLNKKIANLYLGTDKAVYFNQVRMPLNEA
INHVRAKLTTTPDLKVLIHADKNLPYAELDNTFELLKEAGALKISLVTKTTQGGGL

Sequences:

>Translated_136_residues
MSLKKKKNPPSIPVSSMADIAFLLLVFFMVTSVLDTDPDLPIALPDVPGGEQLNKKIANLYLGTDKAVYFNQVRMPLNEA
INHVRAKLTTTPDLKVLIHADKNLPYAELDNTFELLKEAGALKISLVTKTTQGGGL
>Mature_135_residues
SLKKKKNPPSIPVSSMADIAFLLLVFFMVTSVLDTDPDLPIALPDVPGGEQLNKKIANLYLGTDKAVYFNQVRMPLNEAI
NHVRAKLTTTPDLKVLIHADKNLPYAELDNTFELLKEAGALKISLVTKTTQGGGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14846; Mature: 14714

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKKKKNPPSIPVSSMADIAFLLLVFFMVTSVLDTDPDLPIALPDVPGGEQLNKKIANL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHH
YLGTDKAVYFNQVRMPLNEAINHVRAKLTTTPDLKVLIHADKNLPYAELDNTFELLKEAG
HCCCCCEEEHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
ALKISLVTKTTQGGGL
CEEEEEEEECCCCCCC
>Mature Secondary Structure 
SLKKKKNPPSIPVSSMADIAFLLLVFFMVTSVLDTDPDLPIALPDVPGGEQLNKKIANL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHH
YLGTDKAVYFNQVRMPLNEAINHVRAKLTTTPDLKVLIHADKNLPYAELDNTFELLKEAG
HCCCCCEEEHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
ALKISLVTKTTQGGGL
CEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA