Click here to switch to the map view.

The map label for this gene is 45656605

Identifier: 45656605

GI number: 45656605

Start: 852933

End: 854357

Strand: Direct

Name: 45656605

Synonym: LIC10707

Alternate gene names: NA

Gene position: 852933-854357 (Clockwise)

Preceding gene: 45656604

Following gene: 45656606

Centisome position: 19.94

GC content: 36.7

Gene sequence:

>1425_bases
ATGAAAATATTTAATAAAAAACAAACTTTCATTATCGGATTACTTTTGAGCTTAAGTTATCCGATTTTTGCAGACAAAAA
TAGTTTTAAGTTTTGGTTTCCGGATACAAACCATACATACGATCATCTAGTTAAAGATACAAATTGTAATACACAATTCA
ATAACAATGATCCAGAATCTTTTGAACCTAATAAAACGTTTCTTACAATGTATGGAGATAGTCTGGGAGATTTTATAGAT
GAACCTGCTTACGGATATTTCGGTTGGGATCAATATCTAACTTTGATGAACTTTAGTGTAGAATGGAATGTGCAGAACCT
AGCCATAGGAGGATATACAACAAAAAGTATATATGATTTTATTACAGCATGCACAGATAGATACGAGAGGCGTATCAATT
TTAAAACGGCACCTAATGTAGCATTTGAAATCGGAGGAAACGACTTTTGGCGCAATGCACTTCTTTTAACTGCCATGCCT
TGGAAGTTTAGTTCCGTAGTCGGTCGTGTAGCTTTTAATACTAAATCGATTCTGTATCAATTGAGAAATCCAAGACGGAA
TAAAGACATTTTGGTCATGGGAAATTTTCCAAATCTATCTTATAGTCCTACATTAGGAAATATGAATCAATATTTTTCTC
CGATGGCCACTCAACCGGATAGTGGCTTTAGTTATAATATGAGTCAGCTACAATCTGAACAAAAAAATGCAATGCGTGAG
GAAGAAGAAGCTGCTGTTTTAGCTCTGTTGCCTCCAACAGGATGGATTACCTTACTTTATATGCCGATTGATTTAGATCG
TTTGCATACTGAATTTGTAGAATCAATCCTTTATATTAAGGAGACTTACAATCGAGTTATAGTAAACCTAGAAATTCAAA
CCGGAATTGAAGAATTGGATAGACTTCGTACACAGATCAAAAACGCGGGTACGTCGCCCACCATGCAAGACGATTGGTAC
TCTCTCTGGTTACACAGAGTGAAAAACAATGTCAGTATGGTGACTAGTTTAGGAATGTATTTTTCTCAAGGGGCTATTGA
ACAAGCGGTACAAGAAGTAAATGGTAGATACGGGAAAGTACATTTTTTACCTTTGTATCATCTTTTTATACGCAAAAGAG
ATTGTTTTGAGTTTGGTCAATGTTGGGTAGCAAATCCTTGGTTGTATCAGGATCAGATAGGACATTTAAATTATATTGGA
TATACCGTATGGGCGGGGGCTTTGTCCTCAAAGGTGATTGAACTAGATTGGCATAATTCTTTAAGAAACGGTCCGCCACA
TTACAACGGAGCGGTTTCTATTCCTGGGGACGATACTGTGGTTGTTGCTCTGCCGGAAGAACAGCCACCACAAAACGTAG
AAGTGGAGGAATGGCCGATTGATTTTTGGATATTGGTTTGTATTTTTACCGGAAAATGTTGGTGA

Upstream 100 bases:

>100_bases
GATTTTTTACAAAACTAAAAGCCGTAACTGGCTCAGGAATTATTACTTTTACAACTCCAAGTGCGCCAGATCCTCCACAA
TGAATATAAGGAATGAAATT

Downstream 100 bases:

>100_bases
TTCCCAAACAAATACGGCCTTTATATTTATTTATTTTTAGTATATTATTTATTTTTTGTATTCAAGAAAATGAATCTAAT
CCTAGTCTGCAATTGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MKIFNKKQTFIIGLLLSLSYPIFADKNSFKFWFPDTNHTYDHLVKDTNCNTQFNNNDPESFEPNKTFLTMYGDSLGDFID
EPAYGYFGWDQYLTLMNFSVEWNVQNLAIGGYTTKSIYDFITACTDRYERRINFKTAPNVAFEIGGNDFWRNALLLTAMP
WKFSSVVGRVAFNTKSILYQLRNPRRNKDILVMGNFPNLSYSPTLGNMNQYFSPMATQPDSGFSYNMSQLQSEQKNAMRE
EEEAAVLALLPPTGWITLLYMPIDLDRLHTEFVESILYIKETYNRVIVNLEIQTGIEELDRLRTQIKNAGTSPTMQDDWY
SLWLHRVKNNVSMVTSLGMYFSQGAIEQAVQEVNGRYGKVHFLPLYHLFIRKRDCFEFGQCWVANPWLYQDQIGHLNYIG
YTVWAGALSSKVIELDWHNSLRNGPPHYNGAVSIPGDDTVVVALPEEQPPQNVEVEEWPIDFWILVCIFTGKCW

Sequences:

>Translated_474_residues
MKIFNKKQTFIIGLLLSLSYPIFADKNSFKFWFPDTNHTYDHLVKDTNCNTQFNNNDPESFEPNKTFLTMYGDSLGDFID
EPAYGYFGWDQYLTLMNFSVEWNVQNLAIGGYTTKSIYDFITACTDRYERRINFKTAPNVAFEIGGNDFWRNALLLTAMP
WKFSSVVGRVAFNTKSILYQLRNPRRNKDILVMGNFPNLSYSPTLGNMNQYFSPMATQPDSGFSYNMSQLQSEQKNAMRE
EEEAAVLALLPPTGWITLLYMPIDLDRLHTEFVESILYIKETYNRVIVNLEIQTGIEELDRLRTQIKNAGTSPTMQDDWY
SLWLHRVKNNVSMVTSLGMYFSQGAIEQAVQEVNGRYGKVHFLPLYHLFIRKRDCFEFGQCWVANPWLYQDQIGHLNYIG
YTVWAGALSSKVIELDWHNSLRNGPPHYNGAVSIPGDDTVVVALPEEQPPQNVEVEEWPIDFWILVCIFTGKCW
>Mature_474_residues
MKIFNKKQTFIIGLLLSLSYPIFADKNSFKFWFPDTNHTYDHLVKDTNCNTQFNNNDPESFEPNKTFLTMYGDSLGDFID
EPAYGYFGWDQYLTLMNFSVEWNVQNLAIGGYTTKSIYDFITACTDRYERRINFKTAPNVAFEIGGNDFWRNALLLTAMP
WKFSSVVGRVAFNTKSILYQLRNPRRNKDILVMGNFPNLSYSPTLGNMNQYFSPMATQPDSGFSYNMSQLQSEQKNAMRE
EEEAAVLALLPPTGWITLLYMPIDLDRLHTEFVESILYIKETYNRVIVNLEIQTGIEELDRLRTQIKNAGTSPTMQDDWY
SLWLHRVKNNVSMVTSLGMYFSQGAIEQAVQEVNGRYGKVHFLPLYHLFIRKRDCFEFGQCWVANPWLYQDQIGHLNYIG
YTVWAGALSSKVIELDWHNSLRNGPPHYNGAVSIPGDDTVVVALPEEQPPQNVEVEEWPIDFWILVCIFTGKCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54872; Mature: 54872

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFNKKQTFIIGLLLSLSYPIFADKNSFKFWFPDTNHTYDHLVKDTNCNTQFNNNDPES
CCCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCHHHHEECCCCCCCCCCCCCCC
FEPNKTFLTMYGDSLGDFIDEPAYGYFGWDQYLTLMNFSVEWNVQNLAIGGYTTKSIYDF
CCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHEEEEEEEEEEEEEEEECCCCHHHHHHH
ITACTDRYERRINFKTAPNVAFEIGGNDFWRNALLLTAMPWKFSSVVGRVAFNTKSILYQ
HHHHHHHHHHEECCEECCCEEEEECCCHHHCCEEEEEECCCHHHHHHHHHHCCHHHHHHH
LRNPRRNKDILVMGNFPNLSYSPTLGNMNQYFSPMATQPDSGFSYNMSQLQSEQKNAMRE
HCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
EEEAAVLALLPPTGWITLLYMPIDLDRLHTEFVESILYIKETYNRVIVNLEIQTGIEELD
CCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHH
RLRTQIKNAGTSPTMQDDWYSLWLHRVKNNVSMVTSLGMYFSQGAIEQAVQEVNGRYGKV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
HFLPLYHLFIRKRDCFEFGQCWVANPWLYQDQIGHLNYIGYTVWAGALSSKVIELDWHNS
EEEHHHHHHHHHHCHHHHCCEEECCCEEECCCCCCEEEHHHHHHHHHHCCCEEEEECCCC
LRNGPPHYNGAVSIPGDDTVVVALPEEQPPQNVEVEEWPIDFWILVCIFTGKCW
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHCCHHHHEEEHHHCCCCC
>Mature Secondary Structure
MKIFNKKQTFIIGLLLSLSYPIFADKNSFKFWFPDTNHTYDHLVKDTNCNTQFNNNDPES
CCCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCHHHHEECCCCCCCCCCCCCCC
FEPNKTFLTMYGDSLGDFIDEPAYGYFGWDQYLTLMNFSVEWNVQNLAIGGYTTKSIYDF
CCCCCEEEEEECCHHHHHHCCCCCCCCCHHHHHEEEEEEEEEEEEEEEECCCCHHHHHHH
ITACTDRYERRINFKTAPNVAFEIGGNDFWRNALLLTAMPWKFSSVVGRVAFNTKSILYQ
HHHHHHHHHHEECCEECCCEEEEECCCHHHCCEEEEEECCCHHHHHHHHHHCCHHHHHHH
LRNPRRNKDILVMGNFPNLSYSPTLGNMNQYFSPMATQPDSGFSYNMSQLQSEQKNAMRE
HCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
EEEAAVLALLPPTGWITLLYMPIDLDRLHTEFVESILYIKETYNRVIVNLEIQTGIEELD
CCCCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCHHHHH
RLRTQIKNAGTSPTMQDDWYSLWLHRVKNNVSMVTSLGMYFSQGAIEQAVQEVNGRYGKV
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
HFLPLYHLFIRKRDCFEFGQCWVANPWLYQDQIGHLNYIGYTVWAGALSSKVIELDWHNS
EEEHHHHHHHHHHCHHHHCCEEECCCEEECCCCCCEEEHHHHHHHHHHCCCEEEEECCCC
LRNGPPHYNGAVSIPGDDTVVVALPEEQPPQNVEVEEWPIDFWILVCIFTGKCW
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHCCHHHHEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA