Click here to switch to the map view.

The map label for this gene is 45656606

Identifier: 45656606

GI number: 45656606

Start: 854348

End: 855073

Strand: Direct

Name: 45656606

Synonym: LIC10708

Alternate gene names: NA

Gene position: 854348-855073 (Clockwise)

Preceding gene: 45656605

Following gene: 45656607

Centisome position: 19.97

GC content: 35.81

Gene sequence:

>726_bases
ATGTTGGTGATTCCCAAACAAATACGGCCTTTATATTTATTTATTTTTAGTATATTATTTATTTTTTGTATTCAAGAAAA
TGAATCTAATCCTAGTCTGCAATTGGTGCTTGTTCAATCTCAGTTGCAGGTCTTGGCAAAATATGAAATTCCAGAAATCA
GAGCTTGTCTTGTCAATACTCTAGTTTTTGGGAAAATGGTTACTACTTGCTACGAAATCGAAAAAGAATTTTGTAATTTA
GATTTTTTTAATAATATTAAAACACCTGTAGTTTTGCAAAATAGGAGGGACGATTTAACATTTATTAGTATTAACTTTCC
GAATTGTGCGTCCGGAACCGCGCCATTGTTTCTAAAATATTCGAACTTACAAACCCCAGCTTCTATGATATGGAAAGATT
CTTTCGGGTTCGATGGAGCTAATGTAGAATCGCAGTTTCAATTTACCAATCAGAGTAGCTGTAAGGATTTAAAATTGGAA
ACGGCCTCGTTTATAACGGGAGGATTTTCCCGTTTACTAAATTCTATGGAGTTATCTCAATTGGACGGCGTTGAGGCAGA
GTTGGCCTTGATTCCTGCAACTAGTGCTGCTTGTATGAACGATTTAAATCTAAACACCGGTTTAATTTCTTTAACGCAGG
GTATCAAAAGCGGAGCTTTACTAAAAGGAATTTCCTGTGCGTATCAGAGTGGTTCCGGTTTTTCGATTTGCCCTTGGAGT
CTTTAG

Upstream 100 bases:

>100_bases
CTGTGGTTGTTGCTCTGCCGGAAGAACAGCCACCACAAAACGTAGAAGTGGAGGAATGGCCGATTGATTTTTGGATATTG
GTTTGTATTTTTACCGGAAA

Downstream 100 bases:

>100_bases
TGTATTCGAAAAATATAATTCTATGTTTATTTATTTTTTGTTTGTTGTATTGTTTCGGAGATAAGTTAGAAGAACCCAGT
GAAGATTATTATATTCGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLVIPKQIRPLYLFIFSILFIFCIQENESNPSLQLVLVQSQLQVLAKYEIPEIRACLVNTLVFGKMVTTCYEIEKEFCNL
DFFNNIKTPVVLQNRRDDLTFISINFPNCASGTAPLFLKYSNLQTPASMIWKDSFGFDGANVESQFQFTNQSSCKDLKLE
TASFITGGFSRLLNSMELSQLDGVEAELALIPATSAACMNDLNLNTGLISLTQGIKSGALLKGISCAYQSGSGFSICPWS
L

Sequences:

>Translated_241_residues
MLVIPKQIRPLYLFIFSILFIFCIQENESNPSLQLVLVQSQLQVLAKYEIPEIRACLVNTLVFGKMVTTCYEIEKEFCNL
DFFNNIKTPVVLQNRRDDLTFISINFPNCASGTAPLFLKYSNLQTPASMIWKDSFGFDGANVESQFQFTNQSSCKDLKLE
TASFITGGFSRLLNSMELSQLDGVEAELALIPATSAACMNDLNLNTGLISLTQGIKSGALLKGISCAYQSGSGFSICPWS
L
>Mature_241_residues
MLVIPKQIRPLYLFIFSILFIFCIQENESNPSLQLVLVQSQLQVLAKYEIPEIRACLVNTLVFGKMVTTCYEIEKEFCNL
DFFNNIKTPVVLQNRRDDLTFISINFPNCASGTAPLFLKYSNLQTPASMIWKDSFGFDGANVESQFQFTNQSSCKDLKLE
TASFITGGFSRLLNSMELSQLDGVEAELALIPATSAACMNDLNLNTGLISLTQGIKSGALLKGISCAYQSGSGFSICPWS
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26694; Mature: 26694

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIPKQIRPLYLFIFSILFIFCIQENESNPSLQLVLVQSQLQVLAKYEIPEIRACLVNT
CEECCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHH
LVFGKMVTTCYEIEKEFCNLDFFNNIKTPVVLQNRRDDLTFISINFPNCASGTAPLFLKY
HHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEE
SNLQTPASMIWKDSFGFDGANVESQFQFTNQSSCKDLKLETASFITGGFSRLLNSMELSQ
CCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDGVEAELALIPATSAACMNDLNLNTGLISLTQGIKSGALLKGISCAYQSGSGFSICPWS
HCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHEEECCCCCEECCCC
L
C
>Mature Secondary Structure
MLVIPKQIRPLYLFIFSILFIFCIQENESNPSLQLVLVQSQLQVLAKYEIPEIRACLVNT
CEECCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHH
LVFGKMVTTCYEIEKEFCNLDFFNNIKTPVVLQNRRDDLTFISINFPNCASGTAPLFLKY
HHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEE
SNLQTPASMIWKDSFGFDGANVESQFQFTNQSSCKDLKLETASFITGGFSRLLNSMELSQ
CCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LDGVEAELALIPATSAACMNDLNLNTGLISLTQGIKSGALLKGISCAYQSGSGFSICPWS
HCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHEEECCCCCEECCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA