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The map label for this gene is 45656554

Identifier: 45656554

GI number: 45656554

Start: 800133

End: 801206

Strand: Direct

Name: 45656554

Synonym: LIC10656

Alternate gene names: NA

Gene position: 800133-801206 (Clockwise)

Preceding gene: 45656553

Following gene: 45656555

Centisome position: 18.71

GC content: 36.78

Gene sequence:

>1074_bases
ATGGAAAGTCAAGAAGTCAAGTATGTAGGAGTCGATTGTGGAAAGAAAAGTATAGAGGTTGTTCGAATCAATTCGGAAAA
CTCACTCGAACGTAGACAATTCAGCACAACGGAAAGTGGTATTAACAATTTATTACAATGGTTGACCTTGAATGACATTG
TAGGTCTGGAAGCAGGATCTCAATCTTTTAGAATTGCAAAATCAATATTAAACAAAGGGGTTCAAGTAATTGTCCTGAAC
CCAGGCAACCTGGCCACAATCTATCAGTCGTTGAAAAAAACTGATAAAGAAGACTCTCTCAAGATTGCGAGACTCATACA
ACGTTTTCCAATAGAAGAATTACCGGTCGTTCCGATTCCAAACGATGAAGAGGAGGACAATAGAAGACTATGCACGGAAC
AAGAGAACTGGACAAGGCAACTAACGCAAAGTAAGAATCGACTTCATAGTTTATTTACTCAAGCCGGTTTGACACATATC
ACTAAAAAGCATTTAAGAACAAAAGCAAATAGAGAAATCTCTGTAGCCTTACTTCCAAGTCGATACCAAAAAGAAGCGGA
AAGAATATTAAAAGTTTTAGATTTAGTGGAACAAAATCTAAAACTCATAGAAGAAGAAATTAAAGAAGCCTTAAAGAAAA
ATAAGGCTTATGCTCAAACGATTATGTCAATGCCTGGGATCGGTATGATTACTTCTTTGGCGATCATGAGTTATATGGGT
AATTGTAAACGATTCTCTTCAGCTAAACAAGCCGCTTACTACGTTGGTCTTGTGCCCAGGGTTGATATTTCAGGTGACTC
CGCTTATTACGGCAGAATTGTAAATCGTGGTTGTCATTCAATTCGAAGAGTGATCGTTCAAGCGGCTTGGAGTCTTGTCC
GTTGTCAATATGGTGGTAAGATAAAAGAATTCTATCAAAGATTATATCCTAAAAAAGGTGCTAAAAAATCAATCATAGCC
ACTTCTCGCAAAATGATCGAAATCCTTTACACAATGATTAAAACGGGAGAACTTTTCGATTCTATGCCTGAAAAAGTATT
GAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
ACTCAACATCTCGCTCTTTACGAATCGCTCGATGGGAGTGCTGGTGTTATCACCCGACTTTGTTAAGTCCTTCCGCCTCT
TTCATTTTAGGAGAAAAGAA

Downstream 100 bases:

>100_bases
TAAAATTGCGGAAGGGATTGACACAAGAAACATAGGAGAAAGCCCGTTCTGTTGAGTTCATTTTGATTCTAAAATCCTAT
TCAACTTGTGGGGTTGGTTA

Product: transposase, ISlin1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLEAGSQSFRIAKSILNKGVQVIVLN
PGNLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGIGMITSLAIMSYMG
NCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIA
TSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Sequences:

>Translated_357_residues
MESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLEAGSQSFRIAKSILNKGVQVIVLN
PGNLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGIGMITSLAIMSYMG
NCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIA
TSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
>Mature_357_residues
MESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLEAGSQSFRIAKSILNKGVQVIVLN
PGNLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGIGMITSLAIMSYMG
NCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIA
TSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 40711; Mature: 40711

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLEAGS
CCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
RYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGIGMITSLAIMSYMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGK
HHHHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESQEVKYVGVDCGKKSIEVVRINSENSLERRQFSTTESGINNLLQWLTLNDIVGLEAGS
CCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QSFRIAKSILNKGVQVIVLNPGNLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
RYQKEAERILKVLDLVEQNLKLIEEEIKEALKKNKAYAQTIMSMPGIGMITSLAIMSYMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
NCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGK
HHHHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7607411 [H]