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The map label for this gene is 45656494

Identifier: 45656494

GI number: 45656494

Start: 728943

End: 729707

Strand: Reverse

Name: 45656494

Synonym: LIC10596

Alternate gene names: NA

Gene position: 729707-728943 (Counterclockwise)

Preceding gene: 45656495

Following gene: 45656489

Centisome position: 17.06

GC content: 32.68

Gene sequence:

>765_bases
ATGAACCAATTTAAATTTCTTTTAATTGCGATCCTTTTAGTTTTATCCATTGTCAACTGCAATAAAAAAGAGCCTATTTC
CATTTTGGAAATTAGAGATCTCATCGAAAAACAAAATCTTGTAGAAGAACTTCGAAAAGCGGAAGAAGATCTCAGGTTGA
AAGGCGACAATGCAGCATTACTTTATGTTCGAGGTTGGATTCGTTATTTACAAAAAAACCAAGACGCTGCCATGAGCGAT
TTTAAAAAATGTCTGGGATTTGACCCTAAATCCTTGGATTGCAAAAGAGGACTTGGTCTCATATACGAGTCCAACAAAGA
ATATAAAGAAGCCGAATTGGTTTATAAAGAAGCTCTTTCTTTCGCAAAAGAAAAAGGGGCAGACTCAGAAGCTCTCATTC
ATGAGAATATTGGAATACTTTATCTCAGACAAAATCTTAGAAAAGAAAGTTTAGAAGAATTCCAAAAAGCAATTTCACTT
TCTGATAAAGGGGATGCTTATTACGGTTTCAGTTTGTGTATGATTATGGAAGGAAATTCAGAAGGTGCAATTTCTTCTTT
AGAAAAAGGTATTTCTAAATCGTTTCGTTCTAAAGCGTTTCAATCAGAATCACACTTTTTATTATCTAAATTCTACTTTG
AAAAAAGAAAAGACCCAGTAAAAGCAGAATCAGAAATCAAAAAGGCAATCGAAATTTTTCCCCTTCATAAGGAATATCTA
GACGCATTACAAATTTACATAAAAGAAAGAATTAAGAATTCGTAA

Upstream 100 bases:

>100_bases
CAAGGCAAAATTTGATCGCAAGCACAAGTTTTGGAAAATCGATTCTGACTCTTTTTCTGGATTGCGCTCTAAACAATCCG
AGTTAGATTCAAAACAATTT

Downstream 100 bases:

>100_bases
AGAACTTATGTCAAAAATTGAAACATGATAAAAAAATTTTATATATTAGAGTTGTTGAAAAATTCTCTAGTTCCGATTAA
CAAAACTGCTTTAATTGACC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNQFKFLLIAILLVLSIVNCNKKEPISILEIRDLIEKQNLVEELRKAEEDLRLKGDNAALLYVRGWIRYLQKNQDAAMSD
FKKCLGFDPKSLDCKRGLGLIYESNKEYKEAELVYKEALSFAKEKGADSEALIHENIGILYLRQNLRKESLEEFQKAISL
SDKGDAYYGFSLCMIMEGNSEGAISSLEKGISKSFRSKAFQSESHFLLSKFYFEKRKDPVKAESEIKKAIEIFPLHKEYL
DALQIYIKERIKNS

Sequences:

>Translated_254_residues
MNQFKFLLIAILLVLSIVNCNKKEPISILEIRDLIEKQNLVEELRKAEEDLRLKGDNAALLYVRGWIRYLQKNQDAAMSD
FKKCLGFDPKSLDCKRGLGLIYESNKEYKEAELVYKEALSFAKEKGADSEALIHENIGILYLRQNLRKESLEEFQKAISL
SDKGDAYYGFSLCMIMEGNSEGAISSLEKGISKSFRSKAFQSESHFLLSKFYFEKRKDPVKAESEIKKAIEIFPLHKEYL
DALQIYIKERIKNS
>Mature_254_residues
MNQFKFLLIAILLVLSIVNCNKKEPISILEIRDLIEKQNLVEELRKAEEDLRLKGDNAALLYVRGWIRYLQKNQDAAMSD
FKKCLGFDPKSLDCKRGLGLIYESNKEYKEAELVYKEALSFAKEKGADSEALIHENIGILYLRQNLRKESLEEFQKAISL
SDKGDAYYGFSLCMIMEGNSEGAISSLEKGISKSFRSKAFQSESHFLLSKFYFEKRKDPVKAESEIKKAIEIFPLHKEYL
DALQIYIKERIKNS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29316; Mature: 29316

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFKFLLIAILLVLSIVNCNKKEPISILEIRDLIEKQNLVEELRKAEEDLRLKGDNAAL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEE
LYVRGWIRYLQKNQDAAMSDFKKCLGFDPKSLDCKRGLGLIYESNKEYKEAELVYKEALS
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHH
FAKEKGADSEALIHENIGILYLRQNLRKESLEEFQKAISLSDKGDAYYGFSLCMIMEGNS
HHHHCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC
EGAISSLEKGISKSFRSKAFQSESHFLLSKFYFEKRKDPVKAESEIKKAIEIFPLHKEYL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
DALQIYIKERIKNS
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNQFKFLLIAILLVLSIVNCNKKEPISILEIRDLIEKQNLVEELRKAEEDLRLKGDNAAL
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEE
LYVRGWIRYLQKNQDAAMSDFKKCLGFDPKSLDCKRGLGLIYESNKEYKEAELVYKEALS
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHH
FAKEKGADSEALIHENIGILYLRQNLRKESLEEFQKAISLSDKGDAYYGFSLCMIMEGNS
HHHHCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC
EGAISSLEKGISKSFRSKAFQSESHFLLSKFYFEKRKDPVKAESEIKKAIEIFPLHKEYL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHH
DALQIYIKERIKNS
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA