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The map label for this gene is 45656442

Identifier: 45656442

GI number: 45656442

Start: 665500

End: 666870

Strand: Direct

Name: 45656442

Synonym: LIC10544

Alternate gene names: NA

Gene position: 665500-666870 (Clockwise)

Preceding gene: 45656440

Following gene: 45656443

Centisome position: 15.56

GC content: 34.14

Gene sequence:

>1371_bases
TTGGTTTTTCAGAAATATATTTTTGCAATCTTATATTCTTGTATTTTTATCTTTCCTCTATCTGCGGATTCTCAAAAATC
AGATTCATCCACAACTCAAACAGAAGAAAAGGTTCTAAATTCTTCTCATATTTTTCCGAGTAATATCCAGAACAAAAAAG
ATTCTAGTTCTTCTTTAATCAGTTCTGACTTCTTACAAACCTCTTCTACAAATCTTCAATCGCCAACAAATGAAAAATCA
ATCGATAAGGATTCTTCACAGATACAAAACGACGATTTTCAATCCAAAGATGAGATCGAAAAAAATGATCATTCTAAAAA
TACTTCTTCCAAAGAAGCTTCGGAAGAGAACAAACAGATTCCTAAATTCGGATTTTTTATTGATTCTTATTACGCTCACA
ATCCTTATCGTTCCAGTTCAAGAGATAATCGTTATCTCACTCAACCCGCACGTTGGGATGAAATCAATGTAAACCTTGCT
TACATTGATGGTAAGATAGAAACGGATCAATATAGAGGTAGAGTCGCCTTCCAATTTGGAAATTCTGTAAATTCGAATTA
TAAAAACGAAGTCAGTTCGGAAAAAAATTCCAATGAAGTTTCAGTCAGAAATATTCAAGAAGCTTATGCCGGTATTAAAC
TTGCAAAAAATCTATGGTTAGACGGAGGAATTTATTTTGGTAATATCGGGCTTGAAAGTTGGATCTCTCACAATAACTGG
AATTATTCCAGGGCACTCGCTCTGGATTATGTGCCTTATTACTCGAGTGGTTTTAGACTTTCGTTTCAATATTCAGAAAA
ACTATCCTTTCAACTTCATCTGATGAACGGCTGGTCTAACATTACGGAAACTAACAAAGATAAGGCGATTGGATCTCAAA
TCGATTATAAAATTACCGATAAACTTAAAATTACCCATAATACTTTTGTAGGAAACGAGGCTCCTGATAGCCAGGCTCGT
CAAACAAGATATTATAATAATTTAATTCTTCAATATCATTTTACAAAACATTTTATTATTGCAGGTTCTGGAGATGTAGG
AATTCAAAGAGTTTCGGACCCAGGCGTTCAAGCTTATAGACAATGGTATCATGGAACGTTTTGGATCACCTGGAGACCGA
TCGAAAAGTTCAGAACTTCTTTACGTTTGGAAAGAATGTTTGATCCTGAACAAACGATCATTCAAACTGCTTCTAAAAAT
GGATTTTTAACTTCGGGTGCAACGATTACTTTGGATTATATTCCAAACGAAAATGCGTTGGTTCGATTGGAAGGAAGATA
TTTTCGTTCTTACGACGCGGTTTTTGATCGGGATCAATCCAAATCTAAAGAGGAAAAGTTTATTGTTTTTGCGATTTCGG
TTAAAATATAA

Upstream 100 bases:

>100_bases
TATGAAACAAAAAAGAAATTTTCGGAAATTAGAATGTTCTAAAATACGAAATCAAATTGAATTCGGTTCAGATTTCATAA
TAAAAAACGTATCGAACAAA

Downstream 100 bases:

>100_bases
TAGAGTTGTTGAAAAATGAATTCTCCATCTTGTTTCTATTTCGTGAAATGGCCGATTGAAACAGTTTTGTTAACCGCTAC
TATTGAATTTTTCAATAACT

Product: outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MVFQKYIFAILYSCIFIFPLSADSQKSDSSTTQTEEKVLNSSHIFPSNIQNKKDSSSSLISSDFLQTSSTNLQSPTNEKS
IDKDSSQIQNDDFQSKDEIEKNDHSKNTSSKEASEENKQIPKFGFFIDSYYAHNPYRSSSRDNRYLTQPARWDEINVNLA
YIDGKIETDQYRGRVAFQFGNSVNSNYKNEVSSEKNSNEVSVRNIQEAYAGIKLAKNLWLDGGIYFGNIGLESWISHNNW
NYSRALALDYVPYYSSGFRLSFQYSEKLSFQLHLMNGWSNITETNKDKAIGSQIDYKITDKLKITHNTFVGNEAPDSQAR
QTRYYNNLILQYHFTKHFIIAGSGDVGIQRVSDPGVQAYRQWYHGTFWITWRPIEKFRTSLRLERMFDPEQTIIQTASKN
GFLTSGATITLDYIPNENALVRLEGRYFRSYDAVFDRDQSKSKEEKFIVFAISVKI

Sequences:

>Translated_456_residues
MVFQKYIFAILYSCIFIFPLSADSQKSDSSTTQTEEKVLNSSHIFPSNIQNKKDSSSSLISSDFLQTSSTNLQSPTNEKS
IDKDSSQIQNDDFQSKDEIEKNDHSKNTSSKEASEENKQIPKFGFFIDSYYAHNPYRSSSRDNRYLTQPARWDEINVNLA
YIDGKIETDQYRGRVAFQFGNSVNSNYKNEVSSEKNSNEVSVRNIQEAYAGIKLAKNLWLDGGIYFGNIGLESWISHNNW
NYSRALALDYVPYYSSGFRLSFQYSEKLSFQLHLMNGWSNITETNKDKAIGSQIDYKITDKLKITHNTFVGNEAPDSQAR
QTRYYNNLILQYHFTKHFIIAGSGDVGIQRVSDPGVQAYRQWYHGTFWITWRPIEKFRTSLRLERMFDPEQTIIQTASKN
GFLTSGATITLDYIPNENALVRLEGRYFRSYDAVFDRDQSKSKEEKFIVFAISVKI
>Mature_456_residues
MVFQKYIFAILYSCIFIFPLSADSQKSDSSTTQTEEKVLNSSHIFPSNIQNKKDSSSSLISSDFLQTSSTNLQSPTNEKS
IDKDSSQIQNDDFQSKDEIEKNDHSKNTSSKEASEENKQIPKFGFFIDSYYAHNPYRSSSRDNRYLTQPARWDEINVNLA
YIDGKIETDQYRGRVAFQFGNSVNSNYKNEVSSEKNSNEVSVRNIQEAYAGIKLAKNLWLDGGIYFGNIGLESWISHNNW
NYSRALALDYVPYYSSGFRLSFQYSEKLSFQLHLMNGWSNITETNKDKAIGSQIDYKITDKLKITHNTFVGNEAPDSQAR
QTRYYNNLILQYHFTKHFIIAGSGDVGIQRVSDPGVQAYRQWYHGTFWITWRPIEKFRTSLRLERMFDPEQTIIQTASKN
GFLTSGATITLDYIPNENALVRLEGRYFRSYDAVFDRDQSKSKEEKFIVFAISVKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52592; Mature: 52592

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFQKYIFAILYSCIFIFPLSADSQKSDSSTTQTEEKVLNSSHIFPSNIQNKKDSSSSLI
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
SSDFLQTSSTNLQSPTNEKSIDKDSSQIQNDDFQSKDEIEKNDHSKNTSSKEASEENKQI
HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCC
PKFGFFIDSYYAHNPYRSSSRDNRYLTQPARWDEINVNLAYIDGKIETDQYRGRVAFQFG
CHHHEEEEHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCEEECCCCCCEEEEEEC
NSVNSNYKNEVSSEKNSNEVSVRNIQEAYAGIKLAKNLWLDGGIYFGNIGLESWISHNNW
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCHHHHHCCCCC
NYSRALALDYVPYYSSGFRLSFQYSEKLSFQLHLMNGWSNITETNKDKAIGSQIDYKITD
CEEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCHHCCCCCCEEEEC
KLKITHNTFVGNEAPDSQARQTRYYNNLILQYHFTKHFIIAGSGDVGIQRVSDPGVQAYR
EEEEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCEEECCCCCHHHHH
QWYHGTFWITWRPIEKFRTSLRLERMFDPEQTIIQTASKNGFLTSGATITLDYIPNENAL
HHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCEEEEEEECCCCCE
VRLEGRYFRSYDAVFDRDQSKSKEEKFIVFAISVKI
EEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MVFQKYIFAILYSCIFIFPLSADSQKSDSSTTQTEEKVLNSSHIFPSNIQNKKDSSSSLI
CCHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
SSDFLQTSSTNLQSPTNEKSIDKDSSQIQNDDFQSKDEIEKNDHSKNTSSKEASEENKQI
HHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCC
PKFGFFIDSYYAHNPYRSSSRDNRYLTQPARWDEINVNLAYIDGKIETDQYRGRVAFQFG
CHHHEEEEHHHCCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCEEECCCCCCEEEEEEC
NSVNSNYKNEVSSEKNSNEVSVRNIQEAYAGIKLAKNLWLDGGIYFGNIGLESWISHNNW
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCHHHHHCCCCC
NYSRALALDYVPYYSSGFRLSFQYSEKLSFQLHLMNGWSNITETNKDKAIGSQIDYKITD
CEEEEEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCHHCCCCCCEEEEC
KLKITHNTFVGNEAPDSQARQTRYYNNLILQYHFTKHFIIAGSGDVGIQRVSDPGVQAYR
EEEEEEEEECCCCCCCHHHHHHHHHCCEEEEEEEEEEEEEECCCCCCEEECCCCCHHHHH
QWYHGTFWITWRPIEKFRTSLRLERMFDPEQTIIQTASKNGFLTSGATITLDYIPNENAL
HHHCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCEEEEEEECCCCCE
VRLEGRYFRSYDAVFDRDQSKSKEEKFIVFAISVKI
EEECCCCHHHHHHHHCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA