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The map label for this gene is 45656437

Identifier: 45656437

GI number: 45656437

Start: 658301

End: 659638

Strand: Direct

Name: 45656437

Synonym: LIC10539

Alternate gene names: NA

Gene position: 658301-659638 (Clockwise)

Preceding gene: 45656436

Following gene: 45656440

Centisome position: 15.39

GC content: 35.28

Gene sequence:

>1338_bases
ATGATTCCCGATACCTTATTTGTAAAAATAAATTTTATGAAAAAATTTATTTCTTATTGGATCATAATTTTTTTAACCGT
AACGGTTTCACTTAAAAGCGAAACCGTTCTTTTAAAGTCCGGAAAAAAAATAGAAGGAAATATATTAAACCAAGATAAAG
AAACGGTCACGTTTAGACTTTCGGACGGAACCACAAAAGTTTTTCAGAAATCGAGCATTCAAAAAATATCTTTTTCGAAA
ATTACAGAGCCGATCTCTAAAAAAGAAGAAACTAAAAATAAAGAAGAAGAAAAAAAGAGAAAATCAAAAGAACTTGCTGA
GTTAGCCGAAAAACAAAAATCCAAATTAGAAAACTCTAAAAAAAGAGAACAGGAACTGATAGATTCAAAAAGACATTATT
TGGATGTTTCTTTCGGAATCGGAAACGGTACCGAGCAATCGGAGTTGAGGCCTTTTTATCAAACCATTCAATACGCCGGT
TTGGCCTTTAGCAGTTCGGGACAAGCGGAAATCCTTACCAATCCTTATAAAACACCTAACAGTGGCTCTACGACTCGACT
CCGATATGTTTGGAATCGATTAACGTTCGAACTACGAGGAACAGAAACAAAACAAAATATAGACGTAAACGGATTTCAAA
CCCTCGCATTCGGAACCAGTTCAGAATCGGAATCTTCCGGAGAAAGAACGGTTAACGCCATCTTAGGAGAGATGAATACT
AAATTTCAAAAAGTTTCTTCTCGTGTTGGTTTTACCCCTTATCCACATCCGGTTTTGGATCTGCAAATTTTGGGAGGAAT
AGAAAGGATGTGGACTAGAACCAGTCAAGAAGTAGATAGTATCGGTCAAAAAACTGGAAGTGGAATCGATCCTAGTCGCA
TTAGTTTTCGCGAATATTCTAGTCATCATAAGGGATATAGTCTTGGAATTGGATTTGAATGGAAATTTTTGAAGCGATTT
TCCCTACAAGGTCAAATTCTCCATCTAGATATGACAAGCCCTTCTTCTTTTAGAAATAATGAATATAGAATGGACAGTTC
CAACCAAATGCTCCGTTTAAATCAATTTGGTTTAGATTACCGATGGAAATCCATAGGAACCGAAATCAATTTTAGACTTT
CCACAAAGTTAATGGGAAACTGGAGTTTATTTATGGAAACGAGTAACATGAATTTAAAGAATACGCTTCAAACCGGTTAT
ATCACCGAAAACGAAGGCGATCCGGATCAGCTTGCATTGAAAATTTTCGGGCCGAAAATTTTGATTCCTATGTTATACGA
ATCTAAAACGATTTTAACTTATGTTCAAGTTGGAGTCAATTATCGTTTGGATTTTTGA

Upstream 100 bases:

>100_bases
TCCGCAAAATCAAAAAACAATTCAAAAAGTTTCAAACTCTTTTTCATTAAAATTCATTTTTAGAAAATTAAATCGTATTG
CAGGATTCAAACAATGTGTT

Downstream 100 bases:

>100_bases
TTTTTTTCGGTATCTTTCCAATTCCACCACTTTAACTTTTCTGAATTTGGTTTTTTAGTATTTAAAGAATAATGAACACA
ACGAAATACATAGAGCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIPDTLFVKINFMKKFISYWIIIFLTVTVSLKSETVLLKSGKKIEGNILNQDKETVTFRLSDGTTKVFQKSSIQKISFSK
ITEPISKKEETKNKEEEKKRKSKELAELAEKQKSKLENSKKREQELIDSKRHYLDVSFGIGNGTEQSELRPFYQTIQYAG
LAFSSSGQAEILTNPYKTPNSGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMNT
KFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREYSSHHKGYSLGIGFEWKFLKRF
SLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQFGLDYRWKSIGTEINFRLSTKLMGNWSLFMETSNMNLKNTLQTGY
ITENEGDPDQLALKIFGPKILIPMLYESKTILTYVQVGVNYRLDF

Sequences:

>Translated_445_residues
MIPDTLFVKINFMKKFISYWIIIFLTVTVSLKSETVLLKSGKKIEGNILNQDKETVTFRLSDGTTKVFQKSSIQKISFSK
ITEPISKKEETKNKEEEKKRKSKELAELAEKQKSKLENSKKREQELIDSKRHYLDVSFGIGNGTEQSELRPFYQTIQYAG
LAFSSSGQAEILTNPYKTPNSGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMNT
KFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREYSSHHKGYSLGIGFEWKFLKRF
SLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQFGLDYRWKSIGTEINFRLSTKLMGNWSLFMETSNMNLKNTLQTGY
ITENEGDPDQLALKIFGPKILIPMLYESKTILTYVQVGVNYRLDF
>Mature_445_residues
MIPDTLFVKINFMKKFISYWIIIFLTVTVSLKSETVLLKSGKKIEGNILNQDKETVTFRLSDGTTKVFQKSSIQKISFSK
ITEPISKKEETKNKEEEKKRKSKELAELAEKQKSKLENSKKREQELIDSKRHYLDVSFGIGNGTEQSELRPFYQTIQYAG
LAFSSSGQAEILTNPYKTPNSGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMNT
KFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREYSSHHKGYSLGIGFEWKFLKRF
SLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQFGLDYRWKSIGTEINFRLSTKLMGNWSLFMETSNMNLKNTLQTGY
ITENEGDPDQLALKIFGPKILIPMLYESKTILTYVQVGVNYRLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51020; Mature: 51020

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00334 MYB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDTLFVKINFMKKFISYWIIIFLTVTVSLKSETVLLKSGKKIEGNILNQDKETVTFRL
CCCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCEEECCCCCCCCEEEEEEE
SDGTTKVFQKSSIQKISFSKITEPISKKEETKNKEEEKKRKSKELAELAEKQKSKLENSK
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREQELIDSKRHYLDVSFGIGNGTEQSELRPFYQTIQYAGLAFSSSGQAEILTNPYKTPN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCC
SGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMNT
CCCCEEHEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
KFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREYS
HHHHHHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
SHHKGYSLGIGFEWKFLKRFSLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQFGLDY
CCCCCEEEECCCEEHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCE
RWKSIGTEINFRLSTKLMGNWSLFMETSNMNLKNTLQTGYITENEGDPDQLALKIFGPKI
EEHHCCCEEEEEEEEEEECCEEEEEEECCCCHHHHHCCCEEECCCCCHHHEEEEEECCEE
LIPMLYESKTILTYVQVGVNYRLDF
EEEHHCCCCEEEEEEEECCEEEECC
>Mature Secondary Structure
MIPDTLFVKINFMKKFISYWIIIFLTVTVSLKSETVLLKSGKKIEGNILNQDKETVTFRL
CCCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCEEECCCCCCCCEEEEEEE
SDGTTKVFQKSSIQKISFSKITEPISKKEETKNKEEEKKRKSKELAELAEKQKSKLENSK
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KREQELIDSKRHYLDVSFGIGNGTEQSELRPFYQTIQYAGLAFSSSGQAEILTNPYKTPN
HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCC
SGSTTRLRYVWNRLTFELRGTETKQNIDVNGFQTLAFGTSSESESSGERTVNAILGEMNT
CCCCEEHEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
KFQKVSSRVGFTPYPHPVLDLQILGGIERMWTRTSQEVDSIGQKTGSGIDPSRISFREYS
HHHHHHHHCCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
SHHKGYSLGIGFEWKFLKRFSLQGQILHLDMTSPSSFRNNEYRMDSSNQMLRLNQFGLDY
CCCCCEEEECCCEEHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCE
RWKSIGTEINFRLSTKLMGNWSLFMETSNMNLKNTLQTGYITENEGDPDQLALKIFGPKI
EEHHCCCEEEEEEEEEEECCEEEEEEECCCCHHHHHCCCEEECCCCCHHHEEEEEECCEE
LIPMLYESKTILTYVQVGVNYRLDF
EEEHHCCCCEEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA