Click here to switch to the map view.

The map label for this gene is 45656277

Identifier: 45656277

GI number: 45656277

Start: 427241

End: 427999

Strand: Direct

Name: 45656277

Synonym: LIC10377

Alternate gene names: NA

Gene position: 427241-427999 (Clockwise)

Preceding gene: 45656267

Following gene: 45656278

Centisome position: 9.99

GC content: 38.08

Gene sequence:

>759_bases
ATGAAACAATTGGAGGATCCAATCATGATTCAGAAAAAAATAGTAATGTTGGTGTTTTTGATCGTACTCTTTTCTAACTG
TCATAAGTCAGAAAATAAACAAGATAACAATTTACTTTTACTCCAGGCCTTAGCCGTTCAAGATCCAGGAATTGCGGGAC
TATTAGCTCCTATGGATCTTATGCGTTCTATGGGTGGTTCAAGTGGAGCCGGAGCTTATTCTAAAGGTATCGTATCTCCT
TTTCAAACAACCAGTACTACCGAAGAAGTTTCTACTGTGTGTCCATTAGGTGGAAAGGTGTTGCACACTGGTGAATGGAA
TGAAAGTGATTCTCAAACTGGAGCGAGCTTGCAATATTCTCTTAAAGTAAAGTATATAGACTGTAGAATTATGGGTCGTG
ACACATCCGGCACTGGAGCCAATAGAATCATGGCTTTGAACGGTGATGCTATGATTGAAGGAAGAGCAGATCTCATATTT
GATGTCGGTTTTGCCCCTCAAGATGCAAAGCCTGAACTTAGATATACTATGAATTCTACTTCTAGAAACAATTTCGATTC
TTATACTGTAAATGGACATGCGTATCCTAAGAGCGATATTACTACTAAAGCAAGCAATGGAAAATATGCCTTCGAACATA
TGGATGATGTGGATAAAGCAACGATGACCGTGGATGAAACTGTAGAAGTCACCGGAAAGATTGGAGATGAAGAAATCAAT
CAAGTGATAAAGTATAAAAGTACAACTAAACTTCATTAA

Upstream 100 bases:

>100_bases
TCATTTTTCTATTATTTTTTAAACGCAATTTCCTCCTAAATTTTAATTTCATTTCTTAAATTTTTTTTGGCACAAAAAAA
AACGAAAATCGTTGGCATAG

Downstream 100 bases:

>100_bases
TTCTATTACCGCCGAGTAAAAGGCTCGGCGGTTTTTCAATCAAAACGTTTCTTTCAAAAATTATCTTAGAACCGCCTGAC
TTAAAAACCTGATCTTAGAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKQLEDPIMIQKKIVMLVFLIVLFSNCHKSENKQDNNLLLLQALAVQDPGIAGLLAPMDLMRSMGGSSGAGAYSKGIVSP
FQTTSTTEEVSTVCPLGGKVLHTGEWNESDSQTGASLQYSLKVKYIDCRIMGRDTSGTGANRIMALNGDAMIEGRADLIF
DVGFAPQDAKPELRYTMNSTSRNNFDSYTVNGHAYPKSDITTKASNGKYAFEHMDDVDKATMTVDETVEVTGKIGDEEIN
QVIKYKSTTKLH

Sequences:

>Translated_252_residues
MKQLEDPIMIQKKIVMLVFLIVLFSNCHKSENKQDNNLLLLQALAVQDPGIAGLLAPMDLMRSMGGSSGAGAYSKGIVSP
FQTTSTTEEVSTVCPLGGKVLHTGEWNESDSQTGASLQYSLKVKYIDCRIMGRDTSGTGANRIMALNGDAMIEGRADLIF
DVGFAPQDAKPELRYTMNSTSRNNFDSYTVNGHAYPKSDITTKASNGKYAFEHMDDVDKATMTVDETVEVTGKIGDEEIN
QVIKYKSTTKLH
>Mature_252_residues
MKQLEDPIMIQKKIVMLVFLIVLFSNCHKSENKQDNNLLLLQALAVQDPGIAGLLAPMDLMRSMGGSSGAGAYSKGIVSP
FQTTSTTEEVSTVCPLGGKVLHTGEWNESDSQTGASLQYSLKVKYIDCRIMGRDTSGTGANRIMALNGDAMIEGRADLIF
DVGFAPQDAKPELRYTMNSTSRNNFDSYTVNGHAYPKSDITTKASNGKYAFEHMDDVDKATMTVDETVEVTGKIGDEEIN
QVIKYKSTTKLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27519; Mature: 27519

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLEDPIMIQKKIVMLVFLIVLFSNCHKSENKQDNNLLLLQALAVQDPGIAGLLAPMDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
MRSMGGSSGAGAYSKGIVSPFQTTSTTEEVSTVCPLGGKVLHTGEWNESDSQTGASLQYS
HHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEE
LKVKYIDCRIMGRDTSGTGANRIMALNGDAMIEGRADLIFDVGFAPQDAKPELRYTMNST
EEEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCCCCCCEEEEECCC
SRNNFDSYTVNGHAYPKSDITTKASNGKYAFEHMDDVDKATMTVDETVEVTGKIGDEEIN
CCCCCCCEEECCCCCCCCCCEEECCCCCEEHHHHCCHHHHHEEECCEEEEECCCCHHHHH
QVIKYKSTTKLH
HHHHHCCCCCCC
>Mature Secondary Structure
MKQLEDPIMIQKKIVMLVFLIVLFSNCHKSENKQDNNLLLLQALAVQDPGIAGLLAPMDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
MRSMGGSSGAGAYSKGIVSPFQTTSTTEEVSTVCPLGGKVLHTGEWNESDSQTGASLQYS
HHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEE
LKVKYIDCRIMGRDTSGTGANRIMALNGDAMIEGRADLIFDVGFAPQDAKPELRYTMNST
EEEEEEEEEEEECCCCCCCCCEEEEECCCEEEECCCEEEEEECCCCCCCCCCEEEEECCC
SRNNFDSYTVNGHAYPKSDITTKASNGKYAFEHMDDVDKATMTVDETVEVTGKIGDEEIN
CCCCCCCEEECCCCCCCCCCEEECCCCCEEHHHHCCHHHHHEEECCEEEEECCCCHHHHH
QVIKYKSTTKLH
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA