| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656218
Identifier: 45656218
GI number: 45656218
Start: 357239
End: 358912
Strand: Reverse
Name: 45656218
Synonym: LIC10314
Alternate gene names: NA
Gene position: 358912-357239 (Counterclockwise)
Preceding gene: 45656223
Following gene: 229259641
Centisome position: 8.39
GC content: 34.05
Gene sequence:
>1674_bases ATGTTCAGAATCTGGATCGTATTTTTATGTTTCGGTTTTTCTTTATCGTTATTTTCTCAGGAAAGTTCTAAACTCGGAGA AAAAGAAATTCGATCTTCTCAAAGAGTTCGGTTTATTAATCGATCTTCTGCGCGAGCAGGAGAAGAGGTTAGAGGAACCA ATGAAAAGGTAGGTTCCGGACTTGCAGAATCTCTCAAAAAAGAGCCAGATAAAACTCATACACAAGGTGGAATCAGCGTA ACCAGAATTGCACCTGAAGAAAAAAAATTTGGAGCAGATGTGATCTCGGTTTTAGAAGATTCCGATTTTGGTCATATCAA TTCTATCCAGAGAATTCTAACCGGTTTTGTAAAACTCAACTTCGGCTATGACGATAAAAATTCGGATATACTTGCCACCT ATATTTTGTATTACAACGCCATTCATAGAAAAGATAAATCTTATATCTCCAAAAAGTATTCCAATTCTGTAATTAAGTTT GTAACTCCTCAGTCCATAGGAATTTCTAAACGTTATTCGGAATGGCCCGGAAAAACTCAGATTTTGATTCCACTTGTAGA AGACGTTTTAGGTAAGGATGTTCATACGGATGAATTGGAAGACGAAGTTAATAAAGAATTGGATAAGAAAAAAGACGGAC AATCCGAAAAAGATAAGTTTGGAGATCTTCAAAACGAAAAAAACAAAAAAGAATTAGAAGAACTAAAACGTAGAAAAGAA GAGAATCAAAACAAACAGAAAGAAATTTCCGATAAAGAAACAAAAACGGATAAAGAACTTCAAGAACTCAATAAAGATCC AGTAAAAAATAAAGTTCAAATCGTAGAAAAGAAAAAAGAAAAAGAACAAATTCAAAAAGAAAAAGAAGCCGTTAAAAAGG AAGAACAGAAGTTAAAGGAAAAAGAAAAGGAAGTCGTAAAGAAAGACGAAGAAAGAAAAAACAATAATAGCTCTTCAAGT TCTTCGAGCTCATCCAGTTCTTCTAAATCCGATTCTAAAAGCGATTCGAGTAGTAGTAAATCCGGAAGCGATAAGTCTGC GTCCGATGACAAAAAATCAGAAGCGGAATTGAAAAAAGAACTCGCAGATACTAAAAAAGAATTGGAAACAAAAAAAGAAG AGGAGAAGAAAAAAGAAGAATTCGATAAGAACGTCGTCGGAGGAAAAATTCTTTTCTTAAAAACTCTAAAGTATTTAGAT AAAGGACATTATAACAACGAATTACAGGTGTTAGATCCCACAAAAGACGATACGATTATCAGAGGAGATTTTAACAAAAT TTGTGGTAGAACGTTTGAGATCGTAGACGGAAAGGCACTTGTAATTGGCTTCGAAGACGGTCACTCTTCTAACCATAAAC TGATTTTAATCGACCAAGAAACTTTAAAGCCAGTCTTATTCGCAGAAGACAATATATTTTGGAGATCTCCTATGATCATC AAAGGAGACGAGATCTACGCGTTTGAAGAAGTAGAAGAGAAATATTATCTTTCTCGTTTCGGTAAGGATCTCAAAAAACA AGCCAAGTCTTCTGAGGAAATTAGCCCAAATTCAAACGTCACTTTCTATGGAGAAAAAATTTATGTTACCGGCAAGGAAG AAAGTTCGGGTAATATTCAAATCACCGTTTTTAATAAAGCCGATCTAAAACTGATTAAAAAAATTAAACCTTAG
Upstream 100 bases:
>100_bases CAGATGGGGAAAAATCCTTGTCTCAATACAGCGCTTGAGGATAATCTATTTCCGGGTCAAATGGCTCTTTATTCAGATAG ATAAAAAGGAGAATTTTTGA
Downstream 100 bases:
>100_bases TCGATACCCGCCCTAAACCCTAAAAGAAAACTGCAATAATTCTTTAGGGTTTAGGGAAACTATTGTTCAAAATTATATAA TAAAGCACTAATACTCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: P93 Antigen; Borrelia; Signal Peptide
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MFRIWIVFLCFGFSLSLFSQESSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLAESLKKEPDKTHTQGGISV TRIAPEEKKFGADVISVLEDSDFGHINSIQRILTGFVKLNFGYDDKNSDILATYILYYNAIHRKDKSYISKKYSNSVIKF VTPQSIGISKRYSEWPGKTQILIPLVEDVLGKDVHTDELEDEVNKELDKKKDGQSEKDKFGDLQNEKNKKELEELKRRKE ENQNKQKEISDKETKTDKELQELNKDPVKNKVQIVEKKKEKEQIQKEKEAVKKEEQKLKEKEKEVVKKDEERKNNNSSSS SSSSSSSSKSDSKSDSSSSKSGSDKSASDDKKSEAELKKELADTKKELETKKEEEKKKEEFDKNVVGGKILFLKTLKYLD KGHYNNELQVLDPTKDDTIIRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPVLFAEDNIFWRSPMII KGDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGNIQITVFNKADLKLIKKIKP
Sequences:
>Translated_557_residues MFRIWIVFLCFGFSLSLFSQESSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLAESLKKEPDKTHTQGGISV TRIAPEEKKFGADVISVLEDSDFGHINSIQRILTGFVKLNFGYDDKNSDILATYILYYNAIHRKDKSYISKKYSNSVIKF VTPQSIGISKRYSEWPGKTQILIPLVEDVLGKDVHTDELEDEVNKELDKKKDGQSEKDKFGDLQNEKNKKELEELKRRKE ENQNKQKEISDKETKTDKELQELNKDPVKNKVQIVEKKKEKEQIQKEKEAVKKEEQKLKEKEKEVVKKDEERKNNNSSSS SSSSSSSSKSDSKSDSSSSKSGSDKSASDDKKSEAELKKELADTKKELETKKEEEKKKEEFDKNVVGGKILFLKTLKYLD KGHYNNELQVLDPTKDDTIIRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPVLFAEDNIFWRSPMII KGDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGNIQITVFNKADLKLIKKIKP >Mature_557_residues MFRIWIVFLCFGFSLSLFSQESSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSGLAESLKKEPDKTHTQGGISV TRIAPEEKKFGADVISVLEDSDFGHINSIQRILTGFVKLNFGYDDKNSDILATYILYYNAIHRKDKSYISKKYSNSVIKF VTPQSIGISKRYSEWPGKTQILIPLVEDVLGKDVHTDELEDEVNKELDKKKDGQSEKDKFGDLQNEKNKKELEELKRRKE ENQNKQKEISDKETKTDKELQELNKDPVKNKVQIVEKKKEKEQIQKEKEAVKKEEQKLKEKEKEVVKKDEERKNNNSSSS SSSSSSSSKSDSKSDSSSSKSGSDKSASDDKKSEAELKKELADTKKELETKKEEEKKKEEFDKNVVGGKILFLKTLKYLD KGHYNNELQVLDPTKDDTIIRGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPVLFAEDNIFWRSPMII KGDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGNIQITVFNKADLKLIKKIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63680; Mature: 63680
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIWIVFLCFGFSLSLFSQESSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSG CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHCCCCCCCCHHHCCCHHHHHHH LAESLKKEPDKTHTQGGISVTRIAPEEKKFGADVISVLEDSDFGHINSIQRILTGFVKLN HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE FGYDDKNSDILATYILYYNAIHRKDKSYISKKYSNSVIKFVTPQSIGISKRYSEWPGKTQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCE ILIPLVEDVLGKDVHTDELEDEVNKELDKKKDGQSEKDKFGDLQNEKNKKELEELKRRKE EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHH ENQNKQKEISDKETKTDKELQELNKDPVKNKVQIVEKKKEKEQIQKEKEAVKKEEQKLKE HCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKEVVKKDEERKNNNSSSSSSSSSSSSKSDSKSDSSSSKSGSDKSASDDKKSEAELKKE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LADTKKELETKKEEEKKKEEFDKNVVGGKILFLKTLKYLDKGHYNNELQVLDPTKDDTII HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEE RGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPVLFAEDNIFWRSPMII ECCHHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEHHHCCCEEEECCCEEECCCEEE KGDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGNIQ ECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEE ITVFNKADLKLIKKIKP EEEECCHHHHHHHHCCC >Mature Secondary Structure MFRIWIVFLCFGFSLSLFSQESSKLGEKEIRSSQRVRFINRSSARAGEEVRGTNEKVGSG CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEHHCCCCCCCCHHHCCCHHHHHHH LAESLKKEPDKTHTQGGISVTRIAPEEKKFGADVISVLEDSDFGHINSIQRILTGFVKLN HHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE FGYDDKNSDILATYILYYNAIHRKDKSYISKKYSNSVIKFVTPQSIGISKRYSEWPGKTQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCE ILIPLVEDVLGKDVHTDELEDEVNKELDKKKDGQSEKDKFGDLQNEKNKKELEELKRRKE EHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHH ENQNKQKEISDKETKTDKELQELNKDPVKNKVQIVEKKKEKEQIQKEKEAVKKEEQKLKE HCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKEVVKKDEERKNNNSSSSSSSSSSSSKSDSKSDSSSSKSGSDKSASDDKKSEAELKKE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LADTKKELETKKEEEKKKEEFDKNVVGGKILFLKTLKYLDKGHYNNELQVLDPTKDDTII HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEE RGDFNKICGRTFEIVDGKALVIGFEDGHSSNHKLILIDQETLKPVLFAEDNIFWRSPMII ECCHHHHCCCEEEEECCCEEEEEECCCCCCCCEEEEEEHHHCCCEEEECCCEEECCCEEE KGDEIYAFEEVEEKYYLSRFGKDLKKQAKSSEEISPNSNVTFYGEKIYVTGKEESSGNIQ ECCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEE ITVFNKADLKLIKKIKP EEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA