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The map label for this gene is fliE

Identifier: 45656201

GI number: 45656201

Start: 340569

End: 340952

Strand: Reverse

Name: fliE

Synonym: LIC10297

Alternate gene names: 45656201

Gene position: 340952-340569 (Counterclockwise)

Preceding gene: 45656202

Following gene: 45656199

Centisome position: 7.97

GC content: 38.8

Gene sequence:

>384_bases
ATGGAAATCAATTCTAATTCTTCTCTTTGGCATTCGTATAACTCTGGTTATAACGGAAACAAACCTCACCCCTTAAGTCC
GAAAGGAGATCAGGTCAAAGTATCCATTACGGAAGATAGACATTATAAAGATGTAAAACAACCAGTTTCTCCTGATTACG
TAGCAGAAAGTTTTTCAGAAGCAATGAAAAACGCTCTGACCTCGGTCAATGATCTTCAAGTAGAAGCCGATGAATTGACT
CAGAAAATGGTATTTGACCCGAATTCCGTAGACGCCCATCAAGTTATGATCGCTTCTGAAAAAGCAAGAGTGGCTCTTAC
ATTTACAAAAACGATCGCTGACGGCGTAGTTCGTGCTTATAGAGAACTTACTTCTTTAAGATAA

Upstream 100 bases:

>100_bases
ATATGATTTCCGCTTCCAGATCCTATGAAGCAAACGTTCAGATGATTAACGGATCAAAAGCGATGTTTAACAAGGCTTTA
GAAATAGGTAGGGCTTAATT

Downstream 100 bases:

>100_bases
ATTGGTTTTAAACGATTTAAAAGAATATTTCTAAAATTGAATATTGAGCTAATTCTTAAAAATTTATAAAGACTTTTAAA
TGATACGTTCAAACTTGCAA

Product: flagellar hook-basal body protein FliE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEINSNSSLWHSYNSGYNGNKPHPLSPKGDQVKVSITEDRHYKDVKQPVSPDYVAESFSEAMKNALTSVNDLQVEADELT
QKMVFDPNSVDAHQVMIASEKARVALTFTKTIADGVVRAYRELTSLR

Sequences:

>Translated_127_residues
MEINSNSSLWHSYNSGYNGNKPHPLSPKGDQVKVSITEDRHYKDVKQPVSPDYVAESFSEAMKNALTSVNDLQVEADELT
QKMVFDPNSVDAHQVMIASEKARVALTFTKTIADGVVRAYRELTSLR
>Mature_127_residues
MEINSNSSLWHSYNSGYNGNKPHPLSPKGDQVKVSITEDRHYKDVKQPVSPDYVAESFSEAMKNALTSVNDLQVEADELT
QKMVFDPNSVDAHQVMIASEKARVALTFTKTIADGVVRAYRELTSLR

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIE_LEPIC (Q72VK0)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_000287.1
- GeneID:   2769605
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC10297
- HOGENOM:   HBG530499
- OMA:   IFRSDER
- ProtClustDB:   PRK12729
- BioCyc:   LINT267671:LIC_10297-MONOMER
- HAMAP:   MF_00724
- InterPro:   IPR001624
- PRINTS:   PR01006
- TIGRFAMs:   TIGR00205

Pfam domain/function: PF02049 FliE

EC number: NA

Molecular weight: Translated: 14187; Mature: 14187

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINSNSSLWHSYNSGYNGNKPHPLSPKGDQVKVSITEDRHYKDVKQPVSPDYVAESFSE
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHH
AMKNALTSVNDLQVEADELTQKMVFDPNSVDAHQVMIASEKARVALTFTKTIADGVVRAY
HHHHHHCCHHHCEECHHHHHHHHHCCCCCCCHHEEEEECCCCEEEEEHHHHHHHHHHHHH
RELTSLR
HHHHCCC
>Mature Secondary Structure
MEINSNSSLWHSYNSGYNGNKPHPLSPKGDQVKVSITEDRHYKDVKQPVSPDYVAESFSE
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHHH
AMKNALTSVNDLQVEADELTQKMVFDPNSVDAHQVMIASEKARVALTFTKTIADGVVRAY
HHHHHHCCHHHCEECHHHHHHHHHCCCCCCCHHEEEEECCCCEEEEEHHHHHHHHHHHHH
RELTSLR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA