Click here to switch to the map view.

The map label for this gene is 45656185

Identifier: 45656185

GI number: 45656185

Start: 320113

End: 320553

Strand: Direct

Name: 45656185

Synonym: LIC10281

Alternate gene names: NA

Gene position: 320113-320553 (Clockwise)

Preceding gene: 45656183

Following gene: 45656186

Centisome position: 7.48

GC content: 31.52

Gene sequence:

>441_bases
GTGAACTCAAATATGAATCAAAATTTGATAATGAAAAAAAATATTTCTATCCAAACTTCGATTTCAAAAGTTTGGAACGC
ACTGATTGATCCGGAAGTGATTAAACTTTATCTTTTCGGTACCCAGGCAATTTCAGATTGGAAAGAGGGTAGTTCTATTA
TTTTTACGGGTGTTTGGAATGGGAAAGAATATAAGGATCATGGAACCATTCTCAAATTAGAAAAAGAAAAAATGTTTCGA
TATAATTATTGGAGTAGTTTTTCAGGAGTTGCCAATATTCCTGAAAATTATTCTATTCTCACTTTTGAATTAAAACCGGA
AGGAAATTTTACATCTCTTTCTTTAACCCAAGAGAATTTTCCTAATCCAGCAGCTTATGAACATTCTGATGTTGGTTGGA
ACCAGGCTCTGAATATTTTGAAGGAAAATTTGGAAAAATAA

Upstream 100 bases:

>100_bases
AGCAAAAATTTTCACGTATTTTTAACGATTATTAAAATTACGCCTGATTTATTAATTTGATTTGAAAAAATAAAAGAAAT
ACAAATTATATTTTATCTCG

Downstream 100 bases:

>100_bases
TTCGAATTTTTCTATAATATAATCTTATTATGATTTATTGAGAAAGCTACACGTGATTTAATATAATAAATTTTTAATTA
ATTTCTTCTGAACATTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNSNMNQNLIMKKNISIQTSISKVWNALIDPEVIKLYLFGTQAISDWKEGSSIIFTGVWNGKEYKDHGTILKLEKEKMFR
YNYWSSFSGVANIPENYSILTFELKPEGNFTSLSLTQENFPNPAAYEHSDVGWNQALNILKENLEK

Sequences:

>Translated_146_residues
MNSNMNQNLIMKKNISIQTSISKVWNALIDPEVIKLYLFGTQAISDWKEGSSIIFTGVWNGKEYKDHGTILKLEKEKMFR
YNYWSSFSGVANIPENYSILTFELKPEGNFTSLSLTQENFPNPAAYEHSDVGWNQALNILKENLEK
>Mature_146_residues
MNSNMNQNLIMKKNISIQTSISKVWNALIDPEVIKLYLFGTQAISDWKEGSSIIFTGVWNGKEYKDHGTILKLEKEKMFR
YNYWSSFSGVANIPENYSILTFELKPEGNFTSLSLTQENFPNPAAYEHSDVGWNQALNILKENLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16789; Mature: 16789

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNMNQNLIMKKNISIQTSISKVWNALIDPEVIKLYLFGTQAISDWKEGSSIIFTGVWN
CCCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCEEEEEEEEC
GKEYKDHGTILKLEKEKMFRYNYWSSFSGVANIPENYSILTFELKPEGNFTSLSLTQENF
CCEECCCCCEEEEEHHHEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
PNPAAYEHSDVGWNQALNILKENLEK
CCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSNMNQNLIMKKNISIQTSISKVWNALIDPEVIKLYLFGTQAISDWKEGSSIIFTGVWN
CCCCCCCCEEEECCCCEEEHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCEEEEEEEEC
GKEYKDHGTILKLEKEKMFRYNYWSSFSGVANIPENYSILTFELKPEGNFTSLSLTQENF
CCEECCCCCEEEEEHHHEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCC
PNPAAYEHSDVGWNQALNILKENLEK
CCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA