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The map label for this gene is cyoC

Identifier: 45656115

GI number: 45656115

Start: 239657

End: 240301

Strand: Direct

Name: cyoC

Synonym: LIC10210

Alternate gene names: 45656115

Gene position: 239657-240301 (Clockwise)

Preceding gene: 45656114

Following gene: 45656116

Centisome position: 5.6

GC content: 39.07

Gene sequence:

>645_bases
ATGAGTACCGCTAAGCACTTTCATCATGCTCATCACTTTGAGAGTGCAGAGCATCAGTACGACGCTTCTAAACAAGGAAT
TTGGTTGTTTCTTGTTACAGAAATTTTAATGTTCGGCGCCCTATTTGTGGGTTATACAATTTATCATTCTTTGTATCCCG
AAATTTTTCATGCGGGAAGTCATCACTTGTCCGTTCCTATGGGTGCGTTCAATACCGTCGTACTTTTATTTAGTTCGTTT
ACGATGGCTTTGGGGATTCATTACGTCCAAGTAGATAAGAAAAAAGAAGCGATCATTGCTTTGGCTGTGACCGTTCTTTG
TGCACTTACATTTATGGTCGTAAAGTATTTCGAATATACTTCTAAGATCCATCACGGACTCCTTCCCGGAAAATTCTTTA
CAAATACGGAAATGGCTGATATTAAAAACGCTGCTATGTTTTTCGGTTTTTACTTTGTAATGACCGGGATTCACGGATCC
CACGTTTTGATTGGAGCAGGGTTGATCATTTGGGTGATGATCAAAGTAATTAAAGGAGAAGTGAATTCTTCTTATTACAC
ACCGGTAGAAGGTGTAGGTCTTTTCTGGCACGTAGTCGATTTGATCTGGATTTATCTCTTTCCACTTCTTTATTTGGTTG
GTTAA

Upstream 100 bases:

>100_bases
GGGGATAATCCTTGGGGAGGGAAAACTCTCGAATGGACGATTTCTTCTCCACCTACACACGAAAATTTTGAAAAAACTCC
AGTAATTACAGGGGGACCTT

Downstream 100 bases:

>100_bases
CGGCGACGTACTTCCGACTAAATTAAAGTCGAAAACGATTCGATTTCAACAAAACCCTAGGTTTAAACCTGGGGTTTTTT
ATTGGGTTAGATAGTTTTGT

Product: cytochrome/quinol oxidase subunit 3

Products: ferricytochrome c; H2O

Alternate protein names: Quinol oxidase polypeptide III [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTAKHFHHAHHFESAEHQYDASKQGIWLFLVTEILMFGALFVGYTIYHSLYPEIFHAGSHHLSVPMGAFNTVVLLFSSF
TMALGIHYVQVDKKKEAIIALAVTVLCALTFMVVKYFEYTSKIHHGLLPGKFFTNTEMADIKNAAMFFGFYFVMTGIHGS
HVLIGAGLIIWVMIKVIKGEVNSSYYTPVEGVGLFWHVVDLIWIYLFPLLYLVG

Sequences:

>Translated_214_residues
MSTAKHFHHAHHFESAEHQYDASKQGIWLFLVTEILMFGALFVGYTIYHSLYPEIFHAGSHHLSVPMGAFNTVVLLFSSF
TMALGIHYVQVDKKKEAIIALAVTVLCALTFMVVKYFEYTSKIHHGLLPGKFFTNTEMADIKNAAMFFGFYFVMTGIHGS
HVLIGAGLIIWVMIKVIKGEVNSSYYTPVEGVGLFWHVVDLIWIYLFPLLYLVG
>Mature_213_residues
STAKHFHHAHHFESAEHQYDASKQGIWLFLVTEILMFGALFVGYTIYHSLYPEIFHAGSHHLSVPMGAFNTVVLLFSSFT
MALGIHYVQVDKKKEAIIALAVTVLCALTFMVVKYFEYTSKIHHGLLPGKFFTNTEMADIKNAAMFFGFYFVMTGIHGSH
VLIGAGLIIWVMIKVIKGEVNSSYYTPVEGVGLFWHVVDLIWIYLFPLLYLVG

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=209, Percent_Identity=26.7942583732057, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014246
- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.9.3.1

Molecular weight: Translated: 24215; Mature: 24084

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAKHFHHAHHFESAEHQYDASKQGIWLFLVTEILMFGALFVGYTIYHSLYPEIFHAGS
CCCHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HHLSVPMGAFNTVVLLFSSFTMALGIHYVQVDKKKEAIIALAVTVLCALTFMVVKYFEYT
CCEECCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIHHGLLPGKFFTNTEMADIKNAAMFFGFYFVMTGIHGSHVLIGAGLIIWVMIKVIKGE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VNSSYYTPVEGVGLFWHVVDLIWIYLFPLLYLVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STAKHFHHAHHFESAEHQYDASKQGIWLFLVTEILMFGALFVGYTIYHSLYPEIFHAGS
CCHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HHLSVPMGAFNTVVLLFSSFTMALGIHYVQVDKKKEAIIALAVTVLCALTFMVVKYFEYT
CCEECCHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKIHHGLLPGKFFTNTEMADIKNAAMFFGFYFVMTGIHGSHVLIGAGLIIWVMIKVIKGE
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VNSSYYTPVEGVGLFWHVVDLIWIYLFPLLYLVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA