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The map label for this gene is yiaD [C]

Identifier: 45656096

GI number: 45656096

Start: 220760

End: 221347

Strand: Reverse

Name: yiaD [C]

Synonym: LIC10191

Alternate gene names: 45656096

Gene position: 221347-220760 (Counterclockwise)

Preceding gene: 45656098

Following gene: 45656073

Centisome position: 5.18

GC content: 42.18

Gene sequence:

>588_bases
ATGGTCAAAAAGATTTTGAATCTGATTCTGCTCGGTGCAATTGCATTTTCATTCACTCTCTGCTCCTCTGCTGAAAAAAA
AGAGGAATCCGCAGCTCCTGAGCCTTCAACGCAAGAGCAATCCGCAGCTGCAAACAGAAATGTTGACGTCAATTCTCCGG
AAGCGATCGCAGATTCTTTAAACGAAAAACTAAAAGATTTCCGATATCCAGACGGTTTAACTCGTCCTGGATTTAGTTAT
AAAAAAGCGGATGTTACCCCTGGTGATTTCAGCGAGTGGTCTAAAACAAACGCTCCTGTAATCAAAGAAGGTCTTGGAAA
ACTTCCAGATAGTTACGCTCTTGAAATTACAGGACACACCGATGCGATCGGTCCCGAACAAGCAGAAGGTGCTAAAAAAG
GAAATATTTTTTACTCTGAGCTTCGTGCAAATGCAGTTAAACAAGCTTTAATCAAACAAGGGATTCCAGCAAATCGTATC
GTTACTAAAGGTGCCGGTTCTTCCGAGCCAGTTTCTGGTCTTGATGCGAAAGATGCTAAAAATAGAAGAGTCACTTTCCG
TTTTGCGACTTCCGCACCACAACAATAA

Upstream 100 bases:

>100_bases
ACGTTTTTAGCACTCTAAAAAAACAGTTTTCATTTTCCTTCCTTAACCTTATTATGACACTCTGATACCAAACCCCTTAT
ATTTAAGGAAGGAAAGAAAC

Downstream 100 bases:

>100_bases
TTATTAATCGAAAATACAATTCGATCTTTCAAAAGGCCGGTGATTTTTCATCGGCTTTTTTTATTTAGGGGGATTCTATA
AAACGAATTTCTAATTTAGA

Product: peptidoglycan associated cytoplasmic membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYPDGLTRPGFSY
KKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRI
VTKGAGSSEPVSGLDAKDAKNRRVTFRFATSAPQQ

Sequences:

>Translated_195_residues
MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYPDGLTRPGFSY
KKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRI
VTKGAGSSEPVSGLDAKDAKNRRVTFRFATSAPQQ
>Mature_195_residues
MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEKLKDFRYPDGLTRPGFSY
KKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRI
VTKGAGSSEPVSGLDAKDAKNRRVTFRFATSAPQQ

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20913; Mature: 20913

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSL
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
NEKLKDFRYPDGLTRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCC
DAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVTKGAGSSEPVSGLDAKDAK
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
NRRVTFRFATSAPQQ
CCEEEEEECCCCCCC
>Mature Secondary Structure
MVKKILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSL
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
NEKLKDFRYPDGLTRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCCCCEEEEECCCC
DAIGPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVTKGAGSSEPVSGLDAKDAK
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
NRRVTFRFATSAPQQ
CCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA