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The map label for this gene is oxaA

Identifier: 45656063

GI number: 45656063

Start: 185410

End: 187293

Strand: Direct

Name: oxaA

Synonym: LIC10157

Alternate gene names: 45656063

Gene position: 185410-187293 (Clockwise)

Preceding gene: 45656062

Following gene: 45656064

Centisome position: 4.33

GC content: 34.45

Gene sequence:

>1884_bases
ATGGAAGATAGACAAACTAGATTGTTTTTAGCTTTGATTCTCAGTATGGGAATTTGGATGGGAGTGAATTATTTTTTCTT
TCCTAACACATCCACAAAAAAAAATACCGAAACAAAACAAACTCAATCTGATAAAACGTCCGAAAATACAAAACAACAAA
TCACTTCTGGAAAAACAAAAGAATCCAATTCAGCTGATCCTGTTGTTCAGAAAGAAAAAATAACTCCTTTTGATACGAAA
AAAAGTTTTATCGTAACAGATTCTTATATAGTCGAGTTTTCGTCGTTAGGCGGAAAAATTTCCAAATTTTACATGAAAGA
TTTTACGGGTCCTAACGGAGAACTCATTCAAGTTGCTCGTAAAAATCCCGAAACGGTTGTTGTAGATGGCAAAAGTTATC
AAGCGGTGGAATTATCCAGAGATAAAGGATTTGATTTCAATTTTTCAGATTCTCTTGTAGAAATTTCTGATTCACCTTGG
AACTATATTCAATTTTCCTTAACTGAAGATAAAATCAATCATTCCATTTCTTTTTCAGCAGTTTCTCCAGATAGGAGTTA
TCAACTGAAAAAAGAATTTCGTTTTTATCCGAGTGAAAATTATTTTAAACTTTCCATTTCTATCATAAATTTTTCGAAAG
AAAAACTTTCATTTGCCTCCCAAAAAAATGTTCGATATTTGAGAACCTTTGGAAGTCTTGGACCTTATCCAAAGGATAGA
CCTTTGAGCGATAGGGATACCGCAAACTTTTTTCGTTTTTATTATTTAGGCGGCTCTTTTCAGGATACTCTAGACGGAAG
TTCTTCCGTTGGTTTTTGGTCTTCGGTTGGCAATTTTTTTACGGGAAATTCGGGAACTGACGAATCTTTTAGTATTAAAA
CAGATAAAGAATCTGGAGTGGATTTTGCAGGAACTGGTTCTCGTTATTTTATTGCGGTGGCCGATCCTCTTGATCATAAA
CCACATGGAATCGTTTTAGATAATAGACCTAAAAACGAAAGTGGAGCTGTTTTAGTATATGATAATATACTTTTAAATCC
TGGCGAAAATTACAACTTGGATTTTGCATCCTACATAGGTATTAGAGAAAGCGAAGGTATGGCTTTTAAAAATCCTGAGT
TCGATCCGAGTCAATCTAAAAACAGTCCTTTTGTTGGTCTAAGTTCCGATTTAAATAAATCCTTCAATCAAGGTATTACT
ACTCCTTTTCGAAATGGAATTATCTGGATTTTAAAACAAATCTATCGTTTTACGATTCCAAATTACGGTTGGAGCATCAT
TATTTTTGCGATCCTTTTCAAACTCGTTTTTTATCCGTTAAACCAGAAACAAGCGGATAGTATGAAAAAAATGCAAGAAC
TGAGTCCGCAACTTAAAACGATCAATGAAAAGTTTGCCAATGATCCTAAGATGCGTCAGCAAAAAACGATGGAACTTTAT
AAAAAGAATAACGTAAATCCAGTTGGCGGTTGTCTTCCTATGGTGATTCAAATTCCGATTTTTATAGCACTTTATACCGC
TTTCTCTGATACAATAGATCTTTGGAATTCACCGTTTTTATGGGTCAAGGATCTCAGCGAACCAGACGTAATCTGGACTT
CTCCCGCGATTCCTTACTTTACTCAAACCGGAATTGGTTTAAACCTTCTTGCTCTTTTGATGGTAGGGACACAGGTCTTT
CAAACGAGAATGACTTCCGTATCTATGGATCCAAATCAAAAAATGCTAATGTATGTGATGCCGGTTATGATGCTTTATAT
TTTTTGGAATATGCCTTCCGGAGTTACTCTTTATTGGACTTTCCAAAATGTTCTTTCTATTGGTCAACAGTGGATTACAA
ATCATCTAAAAAAAACCGAAGAAAAGAAAAAAGCGAAAGTTTAA

Upstream 100 bases:

>100_bases
CGCTTTGCAGCTCAGTATTTGGAGAATTTTGAGATGCAATCCTCTTTCTCGAGGGTTTGACGATCCGTTACCACCAAACA
CTAAAGGATGAAACTGATTT

Downstream 100 bases:

>100_bases
TCGCAACGAACTCATTATCGAGGATATACACATGGAAAATTACATCTTTGAAGCCGAGGCTAAATCAAAGTCCGAAGCCG
AAGAGTACACTCTCAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTKESNSADPVVQKEKITPFDTK
KSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVARKNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPW
NYIQFSLTEDKINHSISFSAVSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR
PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGVDFAGTGSRYFIAVADPLDHK
PHGIVLDNRPKNESGAVLVYDNILLNPGENYNLDFASYIGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGIT
TPFRNGIIWILKQIYRFTIPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY
KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFLWVKDLSEPDVIWTSPAIPYFTQTGIGLNLLALLMVGTQVF
QTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYWTFQNVLSIGQQWITNHLKKTEEKKKAKV

Sequences:

>Translated_627_residues
MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTKESNSADPVVQKEKITPFDTK
KSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVARKNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPW
NYIQFSLTEDKINHSISFSAVSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR
PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGVDFAGTGSRYFIAVADPLDHK
PHGIVLDNRPKNESGAVLVYDNILLNPGENYNLDFASYIGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGIT
TPFRNGIIWILKQIYRFTIPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY
KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFLWVKDLSEPDVIWTSPAIPYFTQTGIGLNLLALLMVGTQVF
QTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYWTFQNVLSIGQQWITNHLKKTEEKKKAKV
>Mature_627_residues
MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTKESNSADPVVQKEKITPFDTK
KSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVARKNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPW
NYIQFSLTEDKINHSISFSAVSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR
PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGVDFAGTGSRYFIAVADPLDHK
PHGIVLDNRPKNESGAVLVYDNILLNPGENYNLDFASYIGIRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGIT
TPFRNGIIWILKQIYRFTIPNYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY
KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFLWVKDLSEPDVIWTSPAIPYFTQTGIGLNLLALLMVGTQVF
QTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYWTFQNVLSIGQQWITNHLKKTEEKKKAKV

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=290, Percent_Identity=32.4137931034483, Blast_Score=141, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_LEPIC (Q72VY8)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_000149.1
- GeneID:   2770021
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC10157
- NMPDR:   fig|267671.1.peg.149
- HOGENOM:   HBG530005
- OMA:   IRESEGM
- ProtClustDB:   CLSK573386
- BioCyc:   LINT267671:LIC_10157-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 71490; Mature: 71490

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb3153dc)-; HASH(0xda960d8)-; HASH(0xe1ab2f8)-; HASH(0xdaeb5c0)-; HASH(0xdae9b3c)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK
CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC
ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR
CCCCCCCCEECCCCCCCCCCCCEEEECHHEEEHHHCCCHHHHHHHHHCCCCCCCEEEEEC
KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA
CCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHCCCEEEEEE
VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR
ECCCCCHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV
CCCCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC
DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVYDNILLNPGENYNLDFASYIG
CEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECEEECCCCCCCCCHHHHCC
IRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFTIP
EECCCCCEECCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCC
NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFLWVKDLSEPDVIWTSPAIPYF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCE
TQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYWT
ECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
FQNVLSIGQQWITNHLKKTEEKKKAKV
HHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MEDRQTRLFLALILSMGIWMGVNYFFFPNTSTKKNTETKQTQSDKTSENTKQQITSGKTK
CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCC
ESNSADPVVQKEKITPFDTKKSFIVTDSYIVEFSSLGGKISKFYMKDFTGPNGELIQVAR
CCCCCCCCEECCCCCCCCCCCCEEEECHHEEEHHHCCCHHHHHHHHHCCCCCCCEEEEEC
KNPETVVVDGKSYQAVELSRDKGFDFNFSDSLVEISDSPWNYIQFSLTEDKINHSISFSA
CCCCEEEEECCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEEHHHCCCEEEEEE
VSPDRSYQLKKEFRFYPSENYFKLSISIINFSKEKLSFASQKNVRYLRTFGSLGPYPKDR
ECCCCCHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCC
PLSDRDTANFFRFYYLGGSFQDTLDGSSSVGFWSSVGNFFTGNSGTDESFSIKTDKESGV
CCCCCCCCCEEEEEEECCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC
DFAGTGSRYFIAVADPLDHKPHGIVLDNRPKNESGAVLVYDNILLNPGENYNLDFASYIG
CEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEECEEECCCCCCCCCHHHHCC
IRESEGMAFKNPEFDPSQSKNSPFVGLSSDLNKSFNQGITTPFRNGIIWILKQIYRFTIP
EECCCCCEECCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCC
NYGWSIIIFAILFKLVFYPLNQKQADSMKKMQELSPQLKTINEKFANDPKMRQQKTMELY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
KKNNVNPVGGCLPMVIQIPIFIALYTAFSDTIDLWNSPFLWVKDLSEPDVIWTSPAIPYF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCE
TQTGIGLNLLALLMVGTQVFQTRMTSVSMDPNQKMLMYVMPVMMLYIFWNMPSGVTLYWT
ECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
FQNVLSIGQQWITNHLKKTEEKKKAKV
HHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA