Click here to switch to the map view.

The map label for this gene is 45656025

Identifier: 45656025

GI number: 45656025

Start: 132061

End: 133275

Strand: Direct

Name: 45656025

Synonym: LIC10115

Alternate gene names: NA

Gene position: 132061-133275 (Clockwise)

Preceding gene: 45656024

Following gene: 45656026

Centisome position: 3.09

GC content: 36.87

Gene sequence:

>1215_bases
ATGAATCAATTTTCTAAAAATAAAATATCAATTATACTCTCCGTGTTGGGGCTGATTTTTTCTTTTTTACTCATCCAAAA
ATATTACGGTGATCCTAGTTCGGTGGGAGAAACCATTTGTAATGCACTGAGTGAATCTGGTTCTTGTGATAAGGTTTCTG
AAAGCGCTTATTCTGCAATTCGAAACGTTCCTGGTTTAGGAGATCTTCCGATCGCTTTGTTCGGTTTTCTGTTTTATGGT
TTTGTAGGTTTTCTTTTTGTTTTTTCAGAAATTAAAAAAGAATCCGCAGAAGCAAATCTTAGATTAGCGTTTTATGTTTT
AGTTCTTGGACTTGTTGCCGACTTAGGATTATTTTTACTCTCTGTTGGAGTAATTAAAGCGTTATGCGGTCTTTGTGCTG
CAACGTATGTAGTAACGATTGCACTTCTTATCGTGAATTTTCCCACATTTAAATCTCTTTCGGATAAATCGATTGGAACC
GTTTTAAATTCTTTAAACGGAAATGTTTTCAATTTTATTATCGTTATACTTTCCTTTTTTGTTCTAGGACTTTACGGGGG
AAAAATTTCTACGGGTGGAGCAAGACTTGTATCCGGGGCTGCCAATGGGGAAAAGTCTATTTCGGAACAATTGAAAGAAT
TTGGAACAACTCCAACGGTTTCCATTGATTTAAAAGATGTACCTGTTGTAGGCGATCCAAATGCACCGATTACGATTGTA
AAATATGCAGATTTTAATTGTGGTCATTGTATGCATACAAGTAAGATTCTAAAATCTTTCTTAAGCGAGTATAACGGAAT
TATTAAAGTCGCTTATAAAAATTTTCCTTTGGATGGAAATTGTAATCGTCTTGTCGGAAGAAAATCTCCCGAAGCGAGCT
CTTGTGTGGCTGCAAGTGCGGCGCTTTGTGCTAATGAGCAGAAAAAGTTTTACCCGGTTTATACTGGTCTTTATGATGAT
AATGAGGCAGGGGTGATGCACACTGCAGTAACCGTTACTCGTCTTGCTGAAAAGAACGGTCTGAACATGAACCAGTTTAG
ATCTTGTATGAGTTCTACAAAAATTAGAGATCAGATCAATCGTGAAGTGGATGAGGCCGAAAAACTGAAAATCAATTCGA
CTCCTACCTTGTTCATTAACAGCAAACCTCTTCCAAAAAGTGGAACTCCTAACGTTGATTTCTTACACCAATTGATTCGG
CAGCTTATCAATTAG

Upstream 100 bases:

>100_bases
TTCCATTTAAGGAAACAGAAAATAGAATTAGATTTTTCTTTCCATCTGAAAAGGAACCACACATAAAGGTAAATCTATCT
TACAAGATTTTGGGATATTC

Downstream 100 bases:

>100_bases
GGTAGATCTTTTATTTTAGAAATATGGAGAACGAAAAACGATTCTGCAGAAATTGCGGTACGCATATTTTAGCGGAATCT
ATCCAATGTTTATTCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein-Disulfide Isomerase; Dsba Oxidoreductase Family Protein; DsbA-Like Thioredoxin Domain-Containing Protein; Outer Membrane Protein; Dsba-Like Thioredoxin Domain Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein DsbA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNQFSKNKISIILSVLGLIFSFLLIQKYYGDPSSVGETICNALSESGSCDKVSESAYSAIRNVPGLGDLPIALFGFLFYG
FVGFLFVFSEIKKESAEANLRLAFYVLVLGLVADLGLFLLSVGVIKALCGLCAATYVVTIALLIVNFPTFKSLSDKSIGT
VLNSLNGNVFNFIIVILSFFVLGLYGGKISTGGARLVSGAANGEKSISEQLKEFGTTPTVSIDLKDVPVVGDPNAPITIV
KYADFNCGHCMHTSKILKSFLSEYNGIIKVAYKNFPLDGNCNRLVGRKSPEASSCVAASAALCANEQKKFYPVYTGLYDD
NEAGVMHTAVTVTRLAEKNGLNMNQFRSCMSSTKIRDQINREVDEAEKLKINSTPTLFINSKPLPKSGTPNVDFLHQLIR
QLIN

Sequences:

>Translated_404_residues
MNQFSKNKISIILSVLGLIFSFLLIQKYYGDPSSVGETICNALSESGSCDKVSESAYSAIRNVPGLGDLPIALFGFLFYG
FVGFLFVFSEIKKESAEANLRLAFYVLVLGLVADLGLFLLSVGVIKALCGLCAATYVVTIALLIVNFPTFKSLSDKSIGT
VLNSLNGNVFNFIIVILSFFVLGLYGGKISTGGARLVSGAANGEKSISEQLKEFGTTPTVSIDLKDVPVVGDPNAPITIV
KYADFNCGHCMHTSKILKSFLSEYNGIIKVAYKNFPLDGNCNRLVGRKSPEASSCVAASAALCANEQKKFYPVYTGLYDD
NEAGVMHTAVTVTRLAEKNGLNMNQFRSCMSSTKIRDQINREVDEAEKLKINSTPTLFINSKPLPKSGTPNVDFLHQLIR
QLIN
>Mature_404_residues
MNQFSKNKISIILSVLGLIFSFLLIQKYYGDPSSVGETICNALSESGSCDKVSESAYSAIRNVPGLGDLPIALFGFLFYG
FVGFLFVFSEIKKESAEANLRLAFYVLVLGLVADLGLFLLSVGVIKALCGLCAATYVVTIALLIVNFPTFKSLSDKSIGT
VLNSLNGNVFNFIIVILSFFVLGLYGGKISTGGARLVSGAANGEKSISEQLKEFGTTPTVSIDLKDVPVVGDPNAPITIV
KYADFNCGHCMHTSKILKSFLSEYNGIIKVAYKNFPLDGNCNRLVGRKSPEASSCVAASAALCANEQKKFYPVYTGLYDD
NEAGVMHTAVTVTRLAEKNGLNMNQFRSCMSSTKIRDQINREVDEAEKLKINSTPTLFINSKPLPKSGTPNVDFLHQLIR
QLIN

Specific function: Unknown

COG id: COG1651

COG function: function code O; Protein-disulfide isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43739; Mature: 43739

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFSKNKISIILSVLGLIFSFLLIQKYYGDPSSVGETICNALSESGSCDKVSESAYSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RNVPGLGDLPIALFGFLFYGFVGFLFVFSEIKKESAEANLRLAFYVLVLGLVADLGLFLL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVGVIKALCGLCAATYVVTIALLIVNFPTFKSLSDKSIGTVLNSLNGNVFNFIIVILSFF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VLGLYGGKISTGGARLVSGAANGEKSISEQLKEFGTTPTVSIDLKDVPVVGDPNAPITIV
HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEEEE
KYADFNCGHCMHTSKILKSFLSEYNGIIKVAYKNFPLDGNCNRLVGRKSPEASSCVAASA
EECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHH
ALCANEQKKFYPVYTGLYDDNEAGVMHTAVTVTRLAEKNGLNMNQFRSCMSSTKIRDQIN
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
REVDEAEKLKINSTPTLFINSKPLPKSGTPNVDFLHQLIRQLIN
HHHHHHHHEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNQFSKNKISIILSVLGLIFSFLLIQKYYGDPSSVGETICNALSESGSCDKVSESAYSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RNVPGLGDLPIALFGFLFYGFVGFLFVFSEIKKESAEANLRLAFYVLVLGLVADLGLFLL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SVGVIKALCGLCAATYVVTIALLIVNFPTFKSLSDKSIGTVLNSLNGNVFNFIIVILSFF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
VLGLYGGKISTGGARLVSGAANGEKSISEQLKEFGTTPTVSIDLKDVPVVGDPNAPITIV
HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCEEEE
KYADFNCGHCMHTSKILKSFLSEYNGIIKVAYKNFPLDGNCNRLVGRKSPEASSCVAASA
EECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHCCCCCCCHHHHHHHHH
ALCANEQKKFYPVYTGLYDDNEAGVMHTAVTVTRLAEKNGLNMNQFRSCMSSTKIRDQIN
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
REVDEAEKLKINSTPTLFINSKPLPKSGTPNVDFLHQLIRQLIN
HHHHHHHHEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA