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The map label for this gene is yfbG [C]

Identifier: 45655959

GI number: 45655959

Start: 55247

End: 56185

Strand: Direct

Name: yfbG [C]

Synonym: LIC10045

Alternate gene names: 45655959

Gene position: 55247-56185 (Clockwise)

Preceding gene: 45655958

Following gene: 45655960

Centisome position: 1.29

GC content: 37.91

Gene sequence:

>939_bases
ATGAAAAAACAAAGAATATTGATCACAGGGGGGGCTGGGTTTATCGGTTCTCATCTGTGTGAAAGGCTTTTGAAAGAAGG
CAACGAAGTTATCTGTTTAGACAACTTGCATACTGGAAGAAAGAAGAACATTCAAAAACTCTTAAATGATTCTAAGTTCG
AATTTATCAGACACGATGTAACTGATCCCATCAAACTTGAAGTAGATCAGATTTATAATATGGCTTGTCCTGCAAGTCCG
GTGCATTATCAATCAAACGCGATCAAAACGATCAAAACAAACGTTTTAGGAATGATGAATATGCTCGGTCTTGCAAAAAG
AGTAGGGGCAAGAATTCTTCAAGCTTCTACCAGCGAAGTTTACGGAAATCCACTAGAACATCCTCAAAAAGAAACGTATT
GGGGAAACGTAAACCCGATCGGAATCAGAAGTTGTTATGACGAAGGAAAGAGAGTCGCTGAAACTCTTTGTTTCGATTAT
CAGAGAAATCATAAGGTTGATATTCGGGTAATTCGAATTTTTAACACATACGGTCCTAGAATGTTACCAGACGATGGAAG
AGTGGTTAGTAATTTCATCGTTCAGGCTCTAAAAAAAGAAAACATAACATTGTACGGAGATGGAGATCAAACACGTTCTT
TTTGTTATGTGGATGATTTAGTAGAAGGGATCGTTCGGATGATGAACACCGAAAATTTCAATGGGCCAGTAAATCTAGGA
AACGACGGAGAATTTACAGTTCGTGAATTAGCGGAGTTGGTTTTAAAAGAAACTGGTTCTTCTTCTAAAATCGTTCATAA
GCCGCTACCTCAAGATGATCCAGCGCGTAGAAAACCAGATTTGACTCTTGCCAAACAACAACTTGGATTTGAACCGAAAG
TTTCTCTTGTGGAAGGAATTCGGAAAACCATCGAATACTTTAAAAATAACTTGGATTAA

Upstream 100 bases:

>100_bases
CTGGAGAAGTAACTCCCGAAGTTATGGAATGGTTTTTCAGTAAAGGGTTGGATCTAAACGGAAAACCGCTACCAGCGGAG
TTTTTAGAAAAAGAAGAACT

Downstream 100 bases:

>100_bases
ATTTATACAAAGAAATTCTGGACGTACTTTACCGACCAGTCCGGAAGCACTATTTGATCACCGGGAATAAATTATGAACA
TTGGAATTCTAAAAGAATCT

Product: dTDP-glucose 4-6-dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLNDSKFEFIRHDVTDPIKLEVDQIYNMACPASP
VHYQSNAIKTIKTNVLGMMNMLGLAKRVGARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDIRVIRIFNTYGPRMLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIVRMMNTENFNGPVNLG
NDGEFTVRELAELVLKETGSSSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEYFKNNLD

Sequences:

>Translated_312_residues
MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLNDSKFEFIRHDVTDPIKLEVDQIYNMACPASP
VHYQSNAIKTIKTNVLGMMNMLGLAKRVGARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDIRVIRIFNTYGPRMLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIVRMMNTENFNGPVNLG
NDGEFTVRELAELVLKETGSSSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEYFKNNLD
>Mature_312_residues
MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLNDSKFEFIRHDVTDPIKLEVDQIYNMACPASP
VHYQSNAIKTIKTNVLGMMNMLGLAKRVGARILQASTSEVYGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDY
QRNHKVDIRVIRIFNTYGPRMLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIVRMMNTENFNGPVNLG
NDGEFTVRELAELVLKETGSSSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEYFKNNLD

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=310, Percent_Identity=58.3870967741935, Blast_Score=385, Evalue=1e-107,
Organism=Homo sapiens, GI7657641, Length=325, Percent_Identity=29.8461538461538, Blast_Score=121, Evalue=7e-28,
Organism=Escherichia coli, GI1788589, Length=347, Percent_Identity=26.5129682997118, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI48994969, Length=340, Percent_Identity=24.1176470588235, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788353, Length=339, Percent_Identity=24.188790560472, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788365, Length=339, Percent_Identity=24.188790560472, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786974, Length=308, Percent_Identity=24.6753246753247, Blast_Score=72, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17539532, Length=311, Percent_Identity=55.6270096463022, Blast_Score=369, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17568069, Length=329, Percent_Identity=26.4437689969605, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI115532424, Length=323, Percent_Identity=25.3869969040248, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21356223, Length=309, Percent_Identity=58.5760517799353, Blast_Score=389, Evalue=1e-108,
Organism=Drosophila melanogaster, GI19923002, Length=353, Percent_Identity=25.4957507082153, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35327; Mature: 35327

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLNDSKFEFIRHDV
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHCC
TDPIKLEVDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARILQASTSEV
CCCCEEEHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHKVDIRVIRIFNTYGPR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
MLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIVRMMNTENFNGPVNLG
CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NDGEFTVRELAELVLKETGSSSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVSLVEGI
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
RKTIEYFKNNLD
HHHHHHHHHCCC
>Mature Secondary Structure
MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLNDSKFEFIRHDV
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHCC
TDPIKLEVDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARILQASTSEV
CCCCEEEHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YGNPLEHPQKETYWGNVNPIGIRSCYDEGKRVAETLCFDYQRNHKVDIRVIRIFNTYGPR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
MLPDDGRVVSNFIVQALKKENITLYGDGDQTRSFCYVDDLVEGIVRMMNTENFNGPVNLG
CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NDGEFTVRELAELVLKETGSSSKIVHKPLPQDDPARRKPDLTLAKQQLGFEPKVSLVEGI
CCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
RKTIEYFKNNLD
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]