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The map label for this gene is 45655952

Identifier: 45655952

GI number: 45655952

Start: 46607

End: 48115

Strand: Direct

Name: 45655952

Synonym: LIC10038

Alternate gene names: NA

Gene position: 46607-48115 (Clockwise)

Preceding gene: 45655951

Following gene: 45655957

Centisome position: 1.09

GC content: 32.74

Gene sequence:

>1509_bases
ATGGCTTTTCGAATTTTGTTTTTTTCGATTTTTTTGTATTCTTTCTCTGTCTCGTTGTATGCGGATTTGAAAGAAGGTAA
AAAGGCTTATGCAAGAAAGGACTTTTCCAAGGCCATGGACGAGTTCCAGAAGTTTAACGATGCTAATCCGACTTCTGGCG
AAGCTTGGATGTATATGGGTTATATCTACGAATATAGAAGAGATTATCCAAAATCCATTCAAAGTTTTAAAAAGGCGGTG
AGTCTTAGTTTACCTAAAAAAGATCTAATCAATTGTTATCAAAAAATTATTCTCTATTTTAATTATCAAAGGGATTATCA
CGAAGTAATTTCTTATTCCAATCGACTTTTAAAAATTAGTCCTGATCTATCGCATATTCAAAAAATTAGATCTACGGCGG
AAGAAAGGCTTTCTTCAGGTCATCACGTAGTACATCACCATTCTAAAAAACATTCAGAAGAAACGGAAACCGCTGGACCA
AGTAACGAAGAAGAATATCTTAAAATTCTAAAAAAGGAACCGAACAACGCATCTGCTCGTTGGAATTTGTCTCTCATTTA
TGCGAATCATAAAAAATTTCAACAGGCAGAAACTTTACTAGAAGGACTTGTAAAAGACTTTCCTGAGAAACATGATTATC
TTTACAAATACGGAGTAATTTTGATTCGATTGGAAAAATATTCAGAAGCTCTTCGTATTTTGGATAAACTCGAAAATAAA
ATCGGAAACGATAATGCAAAAATGTTATATTATGCAAATTTAAATCAAGCAGTTGCATATCATAAGATGAAACATTATGA
AGAAGCGGCTAAATATTATAGAAAATCTTATACAGCTCATAATACGGTTCAACCTTTGATCGGATTAACTAAACTCAAAT
ACGAAGTTAAGGATTGCGAAAACGCAATCAAAACCGCAGAGAAGGCGCTGGAATTTGGTGAAAGAACTCATGAAATTCGG
ATGTACTTAGCTCTTTGTAAAATTCAAAATAAGGAAGAAACGGAAGGTTATACGATTTTAAAGGAAATCGCTTCTAAGTT
GGAAAAGGAAAATCCGGAATTTAAAAATCTTCCAGATGTTTATAACGATGGAATTTTAAAATTAGCCCGTTATTATACAA
ATCGTGGAGAATATGAAAAGGCTCTTCGTTACTTTCATTCCGTTCAGTCTTCTGAGGAAGAGGAAAGGGAATATCGTTTT
TATCTAGGAAAAGCTTATTATTATACTGGAAAGATAGATCAATCGATTTTGCTTTTGGAAAAAGTAAATAATTCTTCGGG
GGCTTACTATTTATTAGCAAAATGTTATGCGAATAAAGACAATCTTGAAAAAACCATGGAATACATACGCAAAGCAGCAG
AAATAAAACCAGCGATTTGGTCCACTGCAGCAGAAGAAAAAGAGTTTGATCGGTTTAAAGAAAAATCTTCTTTTAAGTCT
TTTTTGGAAACTAAAGGTTCTGATAAAGAAACAAATCAAAATAATAATCAAGCTTTAGATAAGACCTAG

Upstream 100 bases:

>100_bases
GGATTTTTAGGATATATTTTAGGAAATTTATTATAAACCGATTCAAAAAGAGATCACAAATTCACTTTTAAAAAAGATTT
CCTTTCTAATATTTGGTTCT

Downstream 100 bases:

>100_bases
ATTTTATATTAGAGTTGTTGAAAAACTTTCATAGTGGAATTGGCAAAATTGTTTCAATTTTCCATTTCAATTCAAAGAAA
ACAGATGGAGAATTAATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide; TPR-Repeat-Containing Protein

Number of amino acids: Translated: 502; Mature: 501

Protein sequence:

>502_residues
MAFRILFFSIFLYSFSVSLYADLKEGKKAYARKDFSKAMDEFQKFNDANPTSGEAWMYMGYIYEYRRDYPKSIQSFKKAV
SLSLPKKDLINCYQKIILYFNYQRDYHEVISYSNRLLKISPDLSHIQKIRSTAEERLSSGHHVVHHHSKKHSEETETAGP
SNEEEYLKILKKEPNNASARWNLSLIYANHKKFQQAETLLEGLVKDFPEKHDYLYKYGVILIRLEKYSEALRILDKLENK
IGNDNAKMLYYANLNQAVAYHKMKHYEEAAKYYRKSYTAHNTVQPLIGLTKLKYEVKDCENAIKTAEKALEFGERTHEIR
MYLALCKIQNKEETEGYTILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNRGEYEKALRYFHSVQSSEEEEREYRF
YLGKAYYYTGKIDQSILLLEKVNNSSGAYYLLAKCYANKDNLEKTMEYIRKAAEIKPAIWSTAAEEKEFDRFKEKSSFKS
FLETKGSDKETNQNNNQALDKT

Sequences:

>Translated_502_residues
MAFRILFFSIFLYSFSVSLYADLKEGKKAYARKDFSKAMDEFQKFNDANPTSGEAWMYMGYIYEYRRDYPKSIQSFKKAV
SLSLPKKDLINCYQKIILYFNYQRDYHEVISYSNRLLKISPDLSHIQKIRSTAEERLSSGHHVVHHHSKKHSEETETAGP
SNEEEYLKILKKEPNNASARWNLSLIYANHKKFQQAETLLEGLVKDFPEKHDYLYKYGVILIRLEKYSEALRILDKLENK
IGNDNAKMLYYANLNQAVAYHKMKHYEEAAKYYRKSYTAHNTVQPLIGLTKLKYEVKDCENAIKTAEKALEFGERTHEIR
MYLALCKIQNKEETEGYTILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNRGEYEKALRYFHSVQSSEEEEREYRF
YLGKAYYYTGKIDQSILLLEKVNNSSGAYYLLAKCYANKDNLEKTMEYIRKAAEIKPAIWSTAAEEKEFDRFKEKSSFKS
FLETKGSDKETNQNNNQALDKT
>Mature_501_residues
AFRILFFSIFLYSFSVSLYADLKEGKKAYARKDFSKAMDEFQKFNDANPTSGEAWMYMGYIYEYRRDYPKSIQSFKKAVS
LSLPKKDLINCYQKIILYFNYQRDYHEVISYSNRLLKISPDLSHIQKIRSTAEERLSSGHHVVHHHSKKHSEETETAGPS
NEEEYLKILKKEPNNASARWNLSLIYANHKKFQQAETLLEGLVKDFPEKHDYLYKYGVILIRLEKYSEALRILDKLENKI
GNDNAKMLYYANLNQAVAYHKMKHYEEAAKYYRKSYTAHNTVQPLIGLTKLKYEVKDCENAIKTAEKALEFGERTHEIRM
YLALCKIQNKEETEGYTILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNRGEYEKALRYFHSVQSSEEEEREYRFY
LGKAYYYTGKIDQSILLLEKVNNSSGAYYLLAKCYANKDNLEKTMEYIRKAAEIKPAIWSTAAEEKEFDRFKEKSSFKSF
LETKGSDKETNQNNNQALDKT

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59128; Mature: 58996

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRILFFSIFLYSFSVSLYADLKEGKKAYARKDFSKAMDEFQKFNDANPTSGEAWMYMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
YIYEYRRDYPKSIQSFKKAVSLSLPKKDLINCYQKIILYFNYQRDYHEVISYSNRLLKIS
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEC
PDLSHIQKIRSTAEERLSSGHHVVHHHSKKHSEETETAGPSNEEEYLKILKKEPNNASAR
CCHHHHHHHHHHHHHHHHCCCEEEHHCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCE
WNLSLIYANHKKFQQAETLLEGLVKDFPEKHDYLYKYGVILIRLEKYSEALRILDKLENK
EEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
IGNDNAKMLYYANLNQAVAYHKMKHYEEAAKYYRKSYTAHNTVQPLIGLTKLKYEVKDCE
HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
NAIKTAEKALEFGERTHEIRMYLALCKIQNKEETEGYTILKEIASKLEKENPEFKNLPDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
YNDGILKLARYYTNRGEYEKALRYFHSVQSSEEEEREYRFYLGKAYYYTGKIDQSILLLE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCEEEEE
KVNNSSGAYYLLAKCYANKDNLEKTMEYIRKAAEIKPAIWSTAAEEKEFDRFKEKSSFKS
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FLETKGSDKETNQNNNQALDKT
HHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFRILFFSIFLYSFSVSLYADLKEGKKAYARKDFSKAMDEFQKFNDANPTSGEAWMYMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
YIYEYRRDYPKSIQSFKKAVSLSLPKKDLINCYQKIILYFNYQRDYHEVISYSNRLLKIS
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEC
PDLSHIQKIRSTAEERLSSGHHVVHHHSKKHSEETETAGPSNEEEYLKILKKEPNNASAR
CCHHHHHHHHHHHHHHHHCCCEEEHHCHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCE
WNLSLIYANHKKFQQAETLLEGLVKDFPEKHDYLYKYGVILIRLEKYSEALRILDKLENK
EEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
IGNDNAKMLYYANLNQAVAYHKMKHYEEAAKYYRKSYTAHNTVQPLIGLTKLKYEVKDCE
HCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
NAIKTAEKALEFGERTHEIRMYLALCKIQNKEETEGYTILKEIASKLEKENPEFKNLPDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
YNDGILKLARYYTNRGEYEKALRYFHSVQSSEEEEREYRFYLGKAYYYTGKIDQSILLLE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCEEEEE
KVNNSSGAYYLLAKCYANKDNLEKTMEYIRKAAEIKPAIWSTAAEEKEFDRFKEKSSFKS
CCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FLETKGSDKETNQNNNQALDKT
HHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA