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The map label for this gene is 45655926

Identifier: 45655926

GI number: 45655926

Start: 15855

End: 17462

Strand: Direct

Name: 45655926

Synonym: LIC10012

Alternate gene names: NA

Gene position: 15855-17462 (Clockwise)

Preceding gene: 45655923

Following gene: 45655927

Centisome position: 0.37

GC content: 33.27

Gene sequence:

>1608_bases
TTGAATCCAAGATTTCCCATATTAAAACTAAGAATTCATTTGGATCATACTAAGTTCTACATGCTGAGAAATTTATTTTT
TTTCTTCTGTTTGGTGACTCACCCGATATTTTCTACGAGTATAACTTTTCTTCCTGGAAAAATGGATGGAAGGTTGCCTG
TAACTTTAGAAAGAATCGACGACAGATCCCAAGAGATTTCTAAATTTGGGGCTTTTTATGCAAACTTGTTACTAAGGGCG
AGAGTAGATACCACTGAAAAAGTTAGAGATAAAGAAATTTTTAATAAGTTCAAAAACTCTCACTTTGCAAAAGAAGATTT
TCTCAAAATTTGTTCCGAATTATCAACAGACTTTTTAGTTCGGGATGAACTTGGCTTTCAAAACAATATTACCCTTGATC
GAACTTTATACGATTGTTCTCAAAGACGATTGGAAGAATTTCACCTTTCAGAAAAATCCGATCTTTTCATTTTAATGCGT
TCTATGACGGAACGTTCTTTCCCCTGGATTCCTTTTAAAAAAAGACAAACTATCGCTTCAGTATCAAATCAGAGTTCAAG
AGAATTGATTTTCGTAATCGATTTATCTCCTTCTTTTCAAAGAGAAAGAGAAGAATGGGTTCGATTTGTTAAAAATACTT
CTTGGGATTCTTTAACTGGGATTAGAATCGTAACTTTTTCCGAAGGAAAAATTTCTATCCTTCCAAAAGCGAGTTCTTTA
GCGGAATTGAGAACTCAAATTGGAAGTTTAAAGTCGTTCGGTAAATCTAACCTGGACGATTTATCAGAGGCGTTACTTAA
CATAAAACGATCGTTAGTTGGTTCTGTTTCTAAGTCTCAAGAAGTGGTTATTCTTACAAACGCAAAAGGAAAAATCCCTA
ATCCTGCTTTAGCTTCTTCGATTCAGAATCTGCAAACTTCTGGTTACCGGGTTTTATTATTTACAGCGTCGTACTTTTCT
GCGTCTCAAACAAGATATTATAAGGGAATTTTTCCCAAAGGAAATTTATTTGATATAACATATTTTAGAAAAATTAGTAC
AACTAAAGATTCAAAAACTTTAATATTTCGGGGAAGACAAATTTATTTTACATATTCCAACGTGTCTCCTAATCAAGCTA
TAGATGAATCCTCGCTTAACAAAGTATCCTACTCGGGTAAGTATATGGAATCGGAATCAATCAATCCCTTGAATTTTATG
GAAATATATTCTGAATTAACGGGTGATAAAATTTTTACTTCCGACACTTTACAAACAAATCTTACCTTTTTACTTTCCGG
GGTTTTATTAAAGGATGAGTTTAGAGAAGGAAATGAAACGGAAGTTTTAGTAAAATCAGGTGAAAAAGCTTATTGGATTT
TTCTTCCGCAAGGAATGAAAATTCCACAAGTGGACGAGCAAGTTCAGTATCAAACAAGGTATGTTCCGTCTGCAAATTCA
GTGGACGGTGTTGTGAATGTTGCAAATCTAACGGAAAACTATAAAATTTCTCCATCTCAGATTTTAGAATGTACTCCTAT
CCAAGTAAGAAATTACTTTCAGAATACAAATAAAAGTTCCTTTGAATGTATAATCCGAGGTAGAGTTTTACAGGTCAAAG
GATTATAA

Upstream 100 bases:

>100_bases
GAGCTATAAGTCTATTGATCATTATTTTCTCCTTGATCTACTAAATGAAAAAAGCTAATACTTTACCGAGTTTGTGCAAC
ACATTTTTTAATGAGTTGCT

Downstream 100 bases:

>100_bases
TCTTTACAAAGGACTCTTCAATTGAATTCTGAAGAACATATTTTTATTGGCAACGCTTCGAATTCGATTAAGATATTCAA
TCGACTGAAATCTTTGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MNPRFPILKLRIHLDHTKFYMLRNLFFFFCLVTHPIFSTSITFLPGKMDGRLPVTLERIDDRSQEISKFGAFYANLLLRA
RVDTTEKVRDKEIFNKFKNSHFAKEDFLKICSELSTDFLVRDELGFQNNITLDRTLYDCSQRRLEEFHLSEKSDLFILMR
SMTERSFPWIPFKKRQTIASVSNQSSRELIFVIDLSPSFQREREEWVRFVKNTSWDSLTGIRIVTFSEGKISILPKASSL
AELRTQIGSLKSFGKSNLDDLSEALLNIKRSLVGSVSKSQEVVILTNAKGKIPNPALASSIQNLQTSGYRVLLFTASYFS
ASQTRYYKGIFPKGNLFDITYFRKISTTKDSKTLIFRGRQIYFTYSNVSPNQAIDESSLNKVSYSGKYMESESINPLNFM
EIYSELTGDKIFTSDTLQTNLTFLLSGVLLKDEFREGNETEVLVKSGEKAYWIFLPQGMKIPQVDEQVQYQTRYVPSANS
VDGVVNVANLTENYKISPSQILECTPIQVRNYFQNTNKSSFECIIRGRVLQVKGL

Sequences:

>Translated_535_residues
MNPRFPILKLRIHLDHTKFYMLRNLFFFFCLVTHPIFSTSITFLPGKMDGRLPVTLERIDDRSQEISKFGAFYANLLLRA
RVDTTEKVRDKEIFNKFKNSHFAKEDFLKICSELSTDFLVRDELGFQNNITLDRTLYDCSQRRLEEFHLSEKSDLFILMR
SMTERSFPWIPFKKRQTIASVSNQSSRELIFVIDLSPSFQREREEWVRFVKNTSWDSLTGIRIVTFSEGKISILPKASSL
AELRTQIGSLKSFGKSNLDDLSEALLNIKRSLVGSVSKSQEVVILTNAKGKIPNPALASSIQNLQTSGYRVLLFTASYFS
ASQTRYYKGIFPKGNLFDITYFRKISTTKDSKTLIFRGRQIYFTYSNVSPNQAIDESSLNKVSYSGKYMESESINPLNFM
EIYSELTGDKIFTSDTLQTNLTFLLSGVLLKDEFREGNETEVLVKSGEKAYWIFLPQGMKIPQVDEQVQYQTRYVPSANS
VDGVVNVANLTENYKISPSQILECTPIQVRNYFQNTNKSSFECIIRGRVLQVKGL
>Mature_535_residues
MNPRFPILKLRIHLDHTKFYMLRNLFFFFCLVTHPIFSTSITFLPGKMDGRLPVTLERIDDRSQEISKFGAFYANLLLRA
RVDTTEKVRDKEIFNKFKNSHFAKEDFLKICSELSTDFLVRDELGFQNNITLDRTLYDCSQRRLEEFHLSEKSDLFILMR
SMTERSFPWIPFKKRQTIASVSNQSSRELIFVIDLSPSFQREREEWVRFVKNTSWDSLTGIRIVTFSEGKISILPKASSL
AELRTQIGSLKSFGKSNLDDLSEALLNIKRSLVGSVSKSQEVVILTNAKGKIPNPALASSIQNLQTSGYRVLLFTASYFS
ASQTRYYKGIFPKGNLFDITYFRKISTTKDSKTLIFRGRQIYFTYSNVSPNQAIDESSLNKVSYSGKYMESESINPLNFM
EIYSELTGDKIFTSDTLQTNLTFLLSGVLLKDEFREGNETEVLVKSGEKAYWIFLPQGMKIPQVDEQVQYQTRYVPSANS
VDGVVNVANLTENYKISPSQILECTPIQVRNYFQNTNKSSFECIIRGRVLQVKGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61546; Mature: 61546

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRFPILKLRIHLDHTKFYMLRNLFFFFCLVTHPIFSTSITFLPGKMDGRLPVTLERID
CCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEHHHHC
DRSQEISKFGAFYANLLLRARVDTTEKVRDKEIFNKFKNSHFAKEDFLKICSELSTDFLV
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
RDELGFQNNITLDRTLYDCSQRRLEEFHLSEKSDLFILMRSMTERSFPWIPFKKRQTIAS
ECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCCCCHHHHHHHH
VSNQSSRELIFVIDLSPSFQREREEWVRFVKNTSWDSLTGIRIVTFSEGKISILPKASSL
HCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECHHHH
AELRTQIGSLKSFGKSNLDDLSEALLNIKRSLVGSVSKSQEVVILTNAKGKIPNPALASS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
IQNLQTSGYRVLLFTASYFSASQTRYYKGIFPKGNLFDITYFRKISTTKDSKTLIFRGRQ
HHHHHCCCEEEEEEEECHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEECCE
IYFTYSNVSPNQAIDESSLNKVSYSGKYMESESINPLNFMEIYSELTGDKIFTSDTLQTN
EEEEECCCCCCCCCCCHHCCCEECCCCEECCCCCCCHHHHHHHHHHCCCEEEECCHHHHH
LTFLLSGVLLKDEFREGNETEVLVKSGEKAYWIFLPQGMKIPQVDEQVQYQTRYVPSANS
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHEECCCCCC
VDGVVNVANLTENYKISPSQILECTPIQVRNYFQNTNKSSFECIIRGRVLQVKGL
CCCEEEEECCCCCCCCCHHHHEECCHHHHHHHHHCCCCCCEEEEEECEEEEEECC
>Mature Secondary Structure
MNPRFPILKLRIHLDHTKFYMLRNLFFFFCLVTHPIFSTSITFLPGKMDGRLPVTLERID
CCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEHHHHC
DRSQEISKFGAFYANLLLRARVDTTEKVRDKEIFNKFKNSHFAKEDFLKICSELSTDFLV
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE
RDELGFQNNITLDRTLYDCSQRRLEEFHLSEKSDLFILMRSMTERSFPWIPFKKRQTIAS
ECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCCCCHHHHHHHH
VSNQSSRELIFVIDLSPSFQREREEWVRFVKNTSWDSLTGIRIVTFSEGKISILPKASSL
HCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECHHHH
AELRTQIGSLKSFGKSNLDDLSEALLNIKRSLVGSVSKSQEVVILTNAKGKIPNPALASS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHH
IQNLQTSGYRVLLFTASYFSASQTRYYKGIFPKGNLFDITYFRKISTTKDSKTLIFRGRQ
HHHHHCCCEEEEEEEECHHCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEECCE
IYFTYSNVSPNQAIDESSLNKVSYSGKYMESESINPLNFMEIYSELTGDKIFTSDTLQTN
EEEEECCCCCCCCCCCHHCCCEECCCCEECCCCCCCHHHHHHHHHHCCCEEEECCHHHHH
LTFLLSGVLLKDEFREGNETEVLVKSGEKAYWIFLPQGMKIPQVDEQVQYQTRYVPSANS
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHEECCCCCC
VDGVVNVANLTENYKISPSQILECTPIQVRNYFQNTNKSSFECIIRGRVLQVKGL
CCCEEEEECCCCCCCCCHHHHEECCHHHHHHHHHCCCCCCEEEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA