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The map label for this gene is 45359211

Identifier: 45359211

GI number: 45359211

Start: 1588782

End: 1589972

Strand: Direct

Name: 45359211

Synonym: MMP1648

Alternate gene names: NA

Gene position: 1588782-1589972 (Clockwise)

Preceding gene: 45359210

Following gene: 45359216

Centisome position: 95.64

GC content: 33.59

Gene sequence:

>1191_bases
ATGAAGATTGGAATTATTGGAGCAGGCCTTGGGGGCCTATTAAGCGGTGCAATTTTATCAAAAGAACACTCAATTACAAT
TTACGAAAAACTTCCATTTGTTGGGGGCAGATTTACAAATATTCCATACAAAGGGTTTCAATTAACCACCGGTGCACTTC
ACATGATACCCCATGGAAATGAAGGATATTTAGCACAGACACTTCGAAGGGCAGGAAGTAATGTAAAAATAGTAAACTCT
GAGCCAGATGGTTATTTTAGAATAAATGGAAAAAATCACGAATATAAAGACATTTTTGGATTAGTTAGTGCAAAAGATAA
ATTAAAAGCATTAAAACTTGCTGCAAGTCTAAAACTTGGAAAAATCGATAAAAATATGCCTTTTGGAGAATTTTTAGAAG
ATATACCTCTTGCACTTGATGTTGGAAATTCTTTTAGTGGTTGGGCTTTAAGTTTAAATGCATATGATACCCCAATGTCA
GAAATTATCGAAATAAGTAAACTATACCATAAATTTGGGGGCCCTGGAATTCCCGTTGGTGGTTGTAAGGGCGTTATTGA
TAGCCTCGTTGAAATAATCAATAAAAACGGCGGAAAAATCTATACAAGTCATGCGATAGAAAAAATCGAAGTTGAAGAAA
ATAATGTGTTTTTAGATTCGGAACAGTTTGATATAGTAATAAGCAATGCTTCTCCAAAATTAACAGAAAAAATGTCAAAT
ATCAAGTTTATTGAAAAAGAACCCGTTCCATCGAAAGGAATAAAAATAAACGTTGCAAGTAAATTAAGCCTCGTAGATGG
TGCAAGTGTCATATTTACGACAGATTGCGAAAGAATTAATGGTTTAAACCAACCTTCAAATGTTGACAGGAGTTTAGCAA
AGGAAGACTATAATTTAATAATGCTACATGCAACACAGATAAAAAACAACACTAAAGAAGAAATAAGCCTTGCTTTAAAT
GATATTGAATCACTATTTGGTGGAAAAGACTACGAAGTAATATCCATTCAAAGTTACGGTAATGGTTGGCCTGTAAATCA
TGCCTCAAATGGAACTGACCTAAATCCAATCGTTAAAGATAACTTATTACTTGTTGGAGATGGCGTAAAAGGAGTCGGTG
GAATCGAAGTTGAAGGTGTTGCAATGAGTGTTATTGCAGTTTTAAACCATATCGAAAAATTAAAAAAATAA

Upstream 100 bases:

>100_bases
AAAATGCAGTTACGACATGCCACAATTAACCGTAATGTACGGATAATTAACTACTATTTTTTCAACTTATTTTTATTTTA
AATTTTTTTAAGTGATGTTT

Downstream 100 bases:

>100_bases
ATTATTATCTTATTATTTTAACGCCTGTTGCTTTAAACATTACACATAAATTTTTATTTTCTTCAATTTCTAAAGCTTCA
AGGGAATTTGGTGTAATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKIGIIGAGLGGLLSGAILSKEHSITIYEKLPFVGGRFTNIPYKGFQLTTGALHMIPHGNEGYLAQTLRRAGSNVKIVNS
EPDGYFRINGKNHEYKDIFGLVSAKDKLKALKLAASLKLGKIDKNMPFGEFLEDIPLALDVGNSFSGWALSLNAYDTPMS
EIIEISKLYHKFGGPGIPVGGCKGVIDSLVEIINKNGGKIYTSHAIEKIEVEENNVFLDSEQFDIVISNASPKLTEKMSN
IKFIEKEPVPSKGIKINVASKLSLVDGASVIFTTDCERINGLNQPSNVDRSLAKEDYNLIMLHATQIKNNTKEEISLALN
DIESLFGGKDYEVISIQSYGNGWPVNHASNGTDLNPIVKDNLLLVGDGVKGVGGIEVEGVAMSVIAVLNHIEKLKK

Sequences:

>Translated_396_residues
MKIGIIGAGLGGLLSGAILSKEHSITIYEKLPFVGGRFTNIPYKGFQLTTGALHMIPHGNEGYLAQTLRRAGSNVKIVNS
EPDGYFRINGKNHEYKDIFGLVSAKDKLKALKLAASLKLGKIDKNMPFGEFLEDIPLALDVGNSFSGWALSLNAYDTPMS
EIIEISKLYHKFGGPGIPVGGCKGVIDSLVEIINKNGGKIYTSHAIEKIEVEENNVFLDSEQFDIVISNASPKLTEKMSN
IKFIEKEPVPSKGIKINVASKLSLVDGASVIFTTDCERINGLNQPSNVDRSLAKEDYNLIMLHATQIKNNTKEEISLALN
DIESLFGGKDYEVISIQSYGNGWPVNHASNGTDLNPIVKDNLLLVGDGVKGVGGIEVEGVAMSVIAVLNHIEKLKK
>Mature_396_residues
MKIGIIGAGLGGLLSGAILSKEHSITIYEKLPFVGGRFTNIPYKGFQLTTGALHMIPHGNEGYLAQTLRRAGSNVKIVNS
EPDGYFRINGKNHEYKDIFGLVSAKDKLKALKLAASLKLGKIDKNMPFGEFLEDIPLALDVGNSFSGWALSLNAYDTPMS
EIIEISKLYHKFGGPGIPVGGCKGVIDSLVEIINKNGGKIYTSHAIEKIEVEENNVFLDSEQFDIVISNASPKLTEKMSN
IKFIEKEPVPSKGIKINVASKLSLVDGASVIFTTDCERINGLNQPSNVDRSLAKEDYNLIMLHATQIKNNTKEEISLALN
DIESLFGGKDYEVISIQSYGNGWPVNHASNGTDLNPIVKDNLLLVGDGVKGVGGIEVEGVAMSVIAVLNHIEKLKK

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42881; Mature: 42881

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIGAGLGGLLSGAILSKEHSITIYEKLPFVGGRFTNIPYKGFQLTTGALHMIPHGN
CEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCEEEECCEEEEEECCC
EGYLAQTLRRAGSNVKIVNSEPDGYFRINGKNHEYKDIFGLVSAKDKLKALKLAASLKLG
CCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCEEC
KIDKNMPFGEFLEDIPLALDVGNSFSGWALSLNAYDTPMSEIIEISKLYHKFGGPGIPVG
CCCCCCCHHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
GCKGVIDSLVEIINKNGGKIYTSHAIEKIEVEENNVFLDSEQFDIVISNASPKLTEKMSN
CHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCEEEECCCEEEEEECCCCHHHHHHHC
IKFIEKEPVPSKGIKINVASKLSLVDGASVIFTTDCERINGLNQPSNVDRSLAKEDYNLI
CEEEECCCCCCCCEEEEEECEEEEECCCEEEEEECHHHHCCCCCCCCHHHHHHHCCCCEE
MLHATQIKNNTKEEISLALNDIESLFGGKDYEVISIQSYGNGWPVNHASNGTDLNPIVKD
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECC
NLLLVGDGVKGVGGIEVEGVAMSVIAVLNHIEKLKK
CEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIGIIGAGLGGLLSGAILSKEHSITIYEKLPFVGGRFTNIPYKGFQLTTGALHMIPHGN
CEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCEEEECCEEEEEECCC
EGYLAQTLRRAGSNVKIVNSEPDGYFRINGKNHEYKDIFGLVSAKDKLKALKLAASLKLG
CCHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCEEC
KIDKNMPFGEFLEDIPLALDVGNSFSGWALSLNAYDTPMSEIIEISKLYHKFGGPGIPVG
CCCCCCCHHHHHHHCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
GCKGVIDSLVEIINKNGGKIYTSHAIEKIEVEENNVFLDSEQFDIVISNASPKLTEKMSN
CHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCEEEECCCEEEEEECCCCHHHHHHHC
IKFIEKEPVPSKGIKINVASKLSLVDGASVIFTTDCERINGLNQPSNVDRSLAKEDYNLI
CEEEECCCCCCCCEEEEEECEEEEECCCEEEEEECHHHHCCCCCCCCHHHHHHHCCCCEE
MLHATQIKNNTKEEISLALNDIESLFGGKDYEVISIQSYGNGWPVNHASNGTDLNPIVKD
EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEECC
NLLLVGDGVKGVGGIEVEGVAMSVIAVLNHIEKLKK
CEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]