| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is mtrC [H]
Identifier: 45359125
GI number: 45359125
Start: 1516564
End: 1517352
Strand: Direct
Name: mtrC [H]
Synonym: MMP1562
Alternate gene names: 45359125
Gene position: 1516564-1517352 (Clockwise)
Preceding gene: 45359124
Following gene: 45359126
Centisome position: 91.3
GC content: 40.3
Gene sequence:
>789_bases ATGTCACATGGTGGTGGAGGACACGCAGCAGAGCTTTTTCCTGAAGATCAGGTTTTAGCTATCGGCGCTGTATTATCAAT CATCGGAATGTACGTTGCACAATTTGTTCCGTCATTAGCTATGCTCATTGGTGGGTTATTAGCTGCGGGCGCTTGTGTTG CAGGTGCAAACACTACAAGAAGAGTAGCCGCTTACGGATTAGGTACAGGTGTTCCATCAATTGGAATGGTAAGTTTAGGT ATGGGTACAATTTCAGCATTGGCAGGTGTTTTAATACCTTCAGCATTTGGACTCCCAGTACTTGCTACACCAATCCTTGC TGCAGTAATCGCAGTAGTTGTTGGATTTATTGTTGGTAAATTAACACAAAATCCAGTAGGAATGAAAGTACCAATTATCG TTTCGAGTATGACTAAACTCTCATTAATGGGTGCTTTAGCAATTTTAGGATTCTGTACTGCATTTGCAGGCGGATTTTCA GCTGATTTAATTATTAATGGTGCAATCAACAACGGAGTTATTGCATTGGCATTTATTGCAGCAGGTATGTCAATTTTACA CCCATTCAACGCATGTATCGGCCCAGATGAAAGCCACAAGAGAACGATTACTCTTGCAGTTGCATGTGGATTAATGGCAT GGTTGATATTCTCAATTGCAAAATTAGACATAGTTTCAATAGTAGTAGCTGCAATCTTCTGGTTATACACTTACGGATCA TTCGTAAAAATGTCACTTGGTGACGCTTGCGAAGTTAAATATGTACCAGAATTGCCTAAGAAAGAGTAA
Upstream 100 bases:
>100_bases GCTTCATTTGTTTCTTCATTAATCGCAGGAGCAGTATTAATTGGAATGGCTATGGGACTTTAAGTCTACCATGGTTTTCA AAAATATTTGAGGTGTAATT
Downstream 100 bases:
>100_bases GGTGGTATAGATGGATATCGTCAAAGTATGTCCTGAACTTCACATAGTGATGGACGTAGACTCAGGTTTAATAGCCGAAA TGAGAAAAGACATTCTCGTT
Product: tetrahydromethanopterin S-methyltransferase subunit C
Products: NA
Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSHGGGGHAAELFPEDQVLAIGAVLSIIGMYVAQFVPSLAMLIGGLLAAGACVAGANTTRRVAAYGLGTGVPSIGMVSLG MGTISALAGVLIPSAFGLPVLATPILAAVIAVVVGFIVGKLTQNPVGMKVPIIVSSMTKLSLMGALAILGFCTAFAGGFS ADLIINGAINNGVIALAFIAAGMSILHPFNACIGPDESHKRTITLAVACGLMAWLIFSIAKLDIVSIVVAAIFWLYTYGS FVKMSLGDACEVKYVPELPKKE
Sequences:
>Translated_262_residues MSHGGGGHAAELFPEDQVLAIGAVLSIIGMYVAQFVPSLAMLIGGLLAAGACVAGANTTRRVAAYGLGTGVPSIGMVSLG MGTISALAGVLIPSAFGLPVLATPILAAVIAVVVGFIVGKLTQNPVGMKVPIIVSSMTKLSLMGALAILGFCTAFAGGFS ADLIINGAINNGVIALAFIAAGMSILHPFNACIGPDESHKRTITLAVACGLMAWLIFSIAKLDIVSIVVAAIFWLYTYGS FVKMSLGDACEVKYVPELPKKE >Mature_261_residues SHGGGGHAAELFPEDQVLAIGAVLSIIGMYVAQFVPSLAMLIGGLLAAGACVAGANTTRRVAAYGLGTGVPSIGMVSLGM GTISALAGVLIPSAFGLPVLATPILAAVIAVVVGFIVGKLTQNPVGMKVPIIVSSMTKLSLMGALAILGFCTAFAGGFSA DLIINGAINNGVIALAFIAAGMSILHPFNACIGPDESHKRTITLAVACGLMAWLIFSIAKLDIVSIVVAAIFWLYTYGSF VKMSLGDACEVKYVPELPKKE
Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]
COG id: COG4061
COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit C
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtrC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005865 - ProDom: PD013899 [H]
Pfam domain/function: PF04211 MtrC [H]
EC number: =2.1.1.86 [H]
Molecular weight: Translated: 26607; Mature: 26476
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHGGGGHAAELFPEDQVLAIGAVLSIIGMYVAQFVPSLAMLIGGLLAAGACVAGANTTR CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RVAAYGLGTGVPSIGMVSLGMGTISALAGVLIPSAFGLPVLATPILAAVIAVVVGFIVGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTQNPVGMKVPIIVSSMTKLSLMGALAILGFCTAFAGGFSADLIINGAINNGVIALAFIA HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH AGMSILHPFNACIGPDESHKRTITLAVACGLMAWLIFSIAKLDIVSIVVAAIFWLYTYGS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVKMSLGDACEVKYVPELPKKE HHHHHCCCCCCEEECCCCCCCC >Mature Secondary Structure SHGGGGHAAELFPEDQVLAIGAVLSIIGMYVAQFVPSLAMLIGGLLAAGACVAGANTTR CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RVAAYGLGTGVPSIGMVSLGMGTISALAGVLIPSAFGLPVLATPILAAVIAVVVGFIVGK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTQNPVGMKVPIIVSSMTKLSLMGALAILGFCTAFAGGFSADLIINGAINNGVIALAFIA HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH AGMSILHPFNACIGPDESHKRTITLAVACGLMAWLIFSIAKLDIVSIVVAAIFWLYTYGS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVKMSLGDACEVKYVPELPKKE HHHHHCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA