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The map label for this gene is mcrC [H]

Identifier: 45359120

GI number: 45359120

Start: 1511528

End: 1512124

Strand: Direct

Name: mcrC [H]

Synonym: MMP1557

Alternate gene names: 45359120

Gene position: 1511528-1512124 (Clockwise)

Preceding gene: 45359119

Following gene: 45359121

Centisome position: 90.99

GC content: 37.52

Gene sequence:

>597_bases
ATGCCAGTAGGTAGAAAAGAGCAGATCGTTGATTGTAGAGCTGTTATGGGTCTTGGTGAAGGAGGCGGACTTGCACAAAG
AGGAACATTTGCAGAAGGGCTACGTAACGACGTGGTTGTTGTTGCAATGTCTCCAGGGAGAAGGCACATTACAAAACCCG
TGTGCGAAATTACCTATGGAATAAGGGAAGCGGGAATTCAGACCAGCGTTCTTGTATTAGATGCAGGAGGAGGAATTCCG
TCAGATGCTCCACAAGGAAGTTTGGGTTCCACTTTTGGACTTAAACCCGAAGAAGCTAAACAAGTTAATAGGCATAAATT
ATGTGTAATACATTTTGGAAATGTAAAAAGTCACATAATTTACAAAGCTAGATTATTCTTAAAATATGTGGATATTCCTA
CAATAATTGTTTGCCAAACTCCAGTAGATATGGAAGATTTCGCAGCAATTGGAATAAAAACGAAAAATGTAATGCCTTTG
GAATCAAAAACTGAAGGTAAAATCGTTGAAATTATTACTGGCGTAATAAGAGGAGAATCAGCTCCTCAAAAAAAAATTGA
TGAAATCATTGAAAGCATAAAAAAACATTTAGGTTAA

Upstream 100 bases:

>100_bases
ATATCGACAAAAGATTATTAGGTGCGACTGACCCCAGAAGTAAGTTTGATTCTTCTGTCACAATTATCCCAAAGAGCGAA
AAAAACGAGTAAGTGATTTT

Downstream 100 bases:

>100_bases
GGTGATCTTATGGCATACACGCCTCAGTTCTACCCTGGTGCAACAAAAGTTGCTGAAAACAGACGAAATCACTTGAATCC
AAACTATGAATTGGAAAAAT

Product: methyl coenzyme M reductase I, protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MPVGRKEQIVDCRAVMGLGEGGGLAQRGTFAEGLRNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLDAGGGIP
SDAPQGSLGSTFGLKPEEAKQVNRHKLCVIHFGNVKSHIIYKARLFLKYVDIPTIIVCQTPVDMEDFAAIGIKTKNVMPL
ESKTEGKIVEIITGVIRGESAPQKKIDEIIESIKKHLG

Sequences:

>Translated_198_residues
MPVGRKEQIVDCRAVMGLGEGGGLAQRGTFAEGLRNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLDAGGGIP
SDAPQGSLGSTFGLKPEEAKQVNRHKLCVIHFGNVKSHIIYKARLFLKYVDIPTIIVCQTPVDMEDFAAIGIKTKNVMPL
ESKTEGKIVEIITGVIRGESAPQKKIDEIIESIKKHLG
>Mature_197_residues
PVGRKEQIVDCRAVMGLGEGGGLAQRGTFAEGLRNDVVVVAMSPGRRHITKPVCEITYGIREAGIQTSVLVLDAGGGIPS
DAPQGSLGSTFGLKPEEAKQVNRHKLCVIHFGNVKSHIIYKARLFLKYVDIPTIIVCQTPVDMEDFAAIGIKTKNVMPLE
SKTEGKIVEIITGVIRGESAPQKKIDEIIESIKKHLG

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007687 [H]

Pfam domain/function: PF04609 MCR_C [H]

EC number: NA

Molecular weight: Translated: 21354; Mature: 21223

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGRKEQIVDCRAVMGLGEGGGLAQRGTFAEGLRNDVVVVAMSPGRRHITKPVCEITYG
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
IREAGIQTSVLVLDAGGGIPSDAPQGSLGSTFGLKPEEAKQVNRHKLCVIHFGNVKSHII
HHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCHHHH
YKARLFLKYVDIPTIIVCQTPVDMEDFAAIGIKTKNVMPLESKTEGKIVEIITGVIRGES
HHHHEEEEEECCCEEEEEECCCCHHHHHEECEECCCCCCCCCCCCCHHHHHHHHHHCCCC
APQKKIDEIIESIKKHLG
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVGRKEQIVDCRAVMGLGEGGGLAQRGTFAEGLRNDVVVVAMSPGRRHITKPVCEITYG
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
IREAGIQTSVLVLDAGGGIPSDAPQGSLGSTFGLKPEEAKQVNRHKLCVIHFGNVKSHII
HHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCHHHH
YKARLFLKYVDIPTIIVCQTPVDMEDFAAIGIKTKNVMPLESKTEGKIVEIITGVIRGES
HHHHEEEEEECCCEEEEEECCCCHHHHHEECEECCCCCCCCCCCCCHHHHHHHHHHCCCC
APQKKIDEIIESIKKHLG
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA