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The map label for this gene is 45358776

Identifier: 45358776

GI number: 45358776

Start: 1200340

End: 1200732

Strand: Direct

Name: 45358776

Synonym: MMP1213

Alternate gene names: NA

Gene position: 1200340-1200732 (Clockwise)

Preceding gene: 45358775

Following gene: 45358785

Centisome position: 72.26

GC content: 38.68

Gene sequence:

>393_bases
ATGGTAGTAAGAACCTGGAGAAGCATGCAAGAAAGGTACAACCTTATTGGATCAAAATGTAAAACATGTGGAACCGTTTA
CTTCCCTGCAAGAAGTGTCTGCCCAGAATGCAGAAGAAAAGGAGAATTGGAAGATTACAAATTAAACGGTAAAGGTAAAG
TGTACACCTACTCCGTAGTATACGCTGCACCTAAAGACTTTGAAAAACAGTCCCCTTACGTAATTGGTATCGTGGAACTT
GAAGAAGGTACAAAAATCACATCCCAAATCGACTGTGAACCAGAAGAAGTTAAAATAGGAATGCCTGTAGAAGCAACATT
TAGAAAAATAAGAGAAGATGGATGCGATGGCGTAATCAGCTACGGATACAAATTTGTTCCAACTGAACAATAA

Upstream 100 bases:

>100_bases
CAGCAAATGTCGGTGGAACAGGCGGTACAGTCTGTACTCACGTTTTATCAAACAAAAGATAATTAATAATTTAAGCTAAA
AAATGATTTCCGGTGAGATT

Downstream 100 bases:

>100_bases
ATAATTACATTTTTTATTTTTTTAATTAAAATTAGCAAGTTCTAATTACCATTAAATTTTGATATTTCGTATTTTAATGA
ATCAAAATCAATGTATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVVRTWRSMQERYNLIGSKCKTCGTVYFPARSVCPECRRKGELEDYKLNGKGKVYTYSVVYAAPKDFEKQSPYVIGIVEL
EEGTKITSQIDCEPEEVKIGMPVEATFRKIREDGCDGVISYGYKFVPTEQ

Sequences:

>Translated_130_residues
MVVRTWRSMQERYNLIGSKCKTCGTVYFPARSVCPECRRKGELEDYKLNGKGKVYTYSVVYAAPKDFEKQSPYVIGIVEL
EEGTKITSQIDCEPEEVKIGMPVEATFRKIREDGCDGVISYGYKFVPTEQ
>Mature_130_residues
MVVRTWRSMQERYNLIGSKCKTCGTVYFPARSVCPECRRKGELEDYKLNGKGKVYTYSVVYAAPKDFEKQSPYVIGIVEL
EEGTKITSQIDCEPEEVKIGMPVEATFRKIREDGCDGVISYGYKFVPTEQ

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 14842; Mature: 14842

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRTWRSMQERYNLIGSKCKTCGTVYFPARSVCPECRRKGELEDYKLNGKGKVYTYSVV
CEECHHHHHHHHHHHHHCCHHHCCEEEECHHHCCHHHHHCCCCCCEEECCCCCEEEEEEE
YAAPKDFEKQSPYVIGIVELEEGTKITSQIDCEPEEVKIGMPVEATFRKIREDGCDGVIS
EECCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHEEECCCHHHHHHHHHHCCCCCEEC
YGYKFVPTEQ
CCEEEECCCC
>Mature Secondary Structure
MVVRTWRSMQERYNLIGSKCKTCGTVYFPARSVCPECRRKGELEDYKLNGKGKVYTYSVV
CEECHHHHHHHHHHHHHCCHHHCCEEEECHHHCCHHHHHCCCCCCEEECCCCCEEEEEEE
YAAPKDFEKQSPYVIGIVELEEGTKITSQIDCEPEEVKIGMPVEATFRKIREDGCDGVIS
EECCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHEEECCCHHHHHHHHHHCCCCCEEC
YGYKFVPTEQ
CCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]