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The map label for this gene is 45358739

Identifier: 45358739

GI number: 45358739

Start: 1158991

End: 1159554

Strand: Direct

Name: 45358739

Synonym: MMP1176

Alternate gene names: NA

Gene position: 1158991-1159554 (Clockwise)

Preceding gene: 45358738

Following gene: 45358740

Centisome position: 69.77

GC content: 38.3

Gene sequence:

>564_bases
TTGAAAAAAATAGGGGTTTTATCAGCCTTAATTTCATTAATGATTGCACTCAGCTTTTCAGGCTGTGTCGATAATACTGC
CGAATCTTCAGGCGAAATCACCAAAACTGTTGAAATTGTAGATATGGTTGGAAGAACTGTTGAAGTTCCAACGGATATTC
AAAGAATCGTATGTTCTGGACCAGGATGCCTTAGACTCGTAACTTATGTTCAAGCACAGGACAGACTTGTTGGTGTTGAA
TCTATCGAACAAGAAAATATCTCTGGAAGGCCATATCAACTCGCAAACATGGACTTTTTCCAAACTCTACCTATGACCGG
ACTTGGCGGTGGAAAAGAAATAGGCGTTGGACCATACCCTGAACAGGTTATAAGTGCATCTCCAGAAGTTATATTAATTA
CATATATGGATGCAGATAGAGCTGACGAACTTCAGGGAAAATACGGAATTCCCGTTGTAGTATTACAGTATGGAGATGTT
AATTCATTCCATGATGAAAATTTCGTTGGTTGTTTGAATTTACTTGGAAAATTATCCAAAGGGAAGAAAGAGCTCAAGAA
GTAA

Upstream 100 bases:

>100_bases
TTAATATTATATAGAAAATTTTATGTATCAATTATTACATTTAATTTAAAAGTATGATAAATATCATATTTTTAAAACAT
TGATAATATCAGGTGAAATT

Downstream 100 bases:

>100_bases
TTGAATTCTTTGCAGGTGCTGAAAACGACCTTTTAAAAAGAACTGAAAATATTTCTGATGATGAAAAACCTGAGGTATAT
ATTGGAGGACTCTGTGCAAA

Product: putative iron transport system substrate-binding protein, N-term half

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKIGVLSALISLMIALSFSGCVDNTAESSGEITKTVEIVDMVGRTVEVPTDIQRIVCSGPGCLRLVTYVQAQDRLVGVE
SIEQENISGRPYQLANMDFFQTLPMTGLGGGKEIGVGPYPEQVISASPEVILITYMDADRADELQGKYGIPVVVLQYGDV
NSFHDENFVGCLNLLGKLSKGKKELKK

Sequences:

>Translated_187_residues
MKKIGVLSALISLMIALSFSGCVDNTAESSGEITKTVEIVDMVGRTVEVPTDIQRIVCSGPGCLRLVTYVQAQDRLVGVE
SIEQENISGRPYQLANMDFFQTLPMTGLGGGKEIGVGPYPEQVISASPEVILITYMDADRADELQGKYGIPVVVLQYGDV
NSFHDENFVGCLNLLGKLSKGKKELKK
>Mature_187_residues
MKKIGVLSALISLMIALSFSGCVDNTAESSGEITKTVEIVDMVGRTVEVPTDIQRIVCSGPGCLRLVTYVQAQDRLVGVE
SIEQENISGRPYQLANMDFFQTLPMTGLGGGKEIGVGPYPEQVISASPEVILITYMDADRADELQGKYGIPVVVLQYGDV
NSFHDENFVGCLNLLGKLSKGKKELKK

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 20217; Mature: 20217

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVLSALISLMIALSFSGCVDNTAESSGEITKTVEIVDMVGRTVEVPTDIQRIVCSG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHCC
PGCLRLVTYVQAQDRLVGVESIEQENISGRPYQLANMDFFQTLPMTGLGGGKEIGVGPYP
CCHHHHHHHHHHHHHEECHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCH
EQVISASPEVILITYMDADRADELQGKYGIPVVVLQYGDVNSFHDENFVGCLNLLGKLSK
HHHHCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
GKKELKK
HHHHHCC
>Mature Secondary Structure
MKKIGVLSALISLMIALSFSGCVDNTAESSGEITKTVEIVDMVGRTVEVPTDIQRIVCSG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEECCHHHHHHHHCC
PGCLRLVTYVQAQDRLVGVESIEQENISGRPYQLANMDFFQTLPMTGLGGGKEIGVGPYP
CCHHHHHHHHHHHHHEECHHHHHHCCCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCH
EQVISASPEVILITYMDADRADELQGKYGIPVVVLQYGDVNSFHDENFVGCLNLLGKLSK
HHHHCCCCCEEEEEEECCCCHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
GKKELKK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]