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The map label for this gene is 45358740

Identifier: 45358740

GI number: 45358740

Start: 1159500

End: 1160114

Strand: Direct

Name: 45358740

Synonym: MMP1177

Alternate gene names: NA

Gene position: 1159500-1160114 (Clockwise)

Preceding gene: 45358739

Following gene: 45358741

Centisome position: 69.8

GC content: 32.52

Gene sequence:

>615_bases
TTGTTTGAATTTACTTGGAAAATTATCCAAAGGGAAGAAAGAGCTCAAGAAGTAATTGAATTCTTTGCAGGTGCTGAAAA
CGACCTTTTAAAAAGAACTGAAAATATTTCTGATGATGAAAAACCTGAGGTATATATTGGAGGACTCTGTGCAAAAGGTG
CCCATGGAATTGACAGTACATCAAGTAACTACGCTCCATTTAATGCAGTGAATGCTAAAAACGTTGCATCTTCACTTGAT
GTAGCAAAACAAGTATTCATAAGCAAAGAACAGCTTTTAGAATGGAATCCTGAGATCATATTTATTGATACTGGAAGTTA
TGCATTAATAAAAGAAGATTATGAAAAAAATTCAGAATACTATGAATCTCTTGATGCATTTAAAAATGGCAAGGTATACA
CCCAGTTTCCATACAATTACTACACTACAAATTACGACACTGCATTGGCTAATGCGTACTATATCGGAAAAATCGTATAC
CCTGAACGGTTTTCGGACATAAATATCGAAGAAAAATCTGATGAAATATATGAATTCTTAGTTTCAAAAGCTGTTTACAG
TGAAATGGCTGAAAACTACTGCGGATTTGAAAATATTAATTTTTCAAACCAATAA

Upstream 100 bases:

>100_bases
ATGCAGATAGAGCTGACGAACTTCAGGGAAAATACGGAATTCCCGTTGTAGTATTACAGTATGGAGATGTTAATTCATTC
CATGATGAAAATTTCGTTGG

Downstream 100 bases:

>100_bases
CTTTCTTTTTTCTTTTTTTATTCATTAATTAAATTTTATTATTTTTTAGTAATACTATATCGAAAAATATATGTAATAAT
AATACTACATTTTTTAAAAG

Product: putative iron transport system substrate-binding protein, C-term half

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFEFTWKIIQREERAQEVIEFFAGAENDLLKRTENISDDEKPEVYIGGLCAKGAHGIDSTSSNYAPFNAVNAKNVASSLD
VAKQVFISKEQLLEWNPEIIFIDTGSYALIKEDYEKNSEYYESLDAFKNGKVYTQFPYNYYTTNYDTALANAYYIGKIVY
PERFSDINIEEKSDEIYEFLVSKAVYSEMAENYCGFENINFSNQ

Sequences:

>Translated_204_residues
MFEFTWKIIQREERAQEVIEFFAGAENDLLKRTENISDDEKPEVYIGGLCAKGAHGIDSTSSNYAPFNAVNAKNVASSLD
VAKQVFISKEQLLEWNPEIIFIDTGSYALIKEDYEKNSEYYESLDAFKNGKVYTQFPYNYYTTNYDTALANAYYIGKIVY
PERFSDINIEEKSDEIYEFLVSKAVYSEMAENYCGFENINFSNQ
>Mature_204_residues
MFEFTWKIIQREERAQEVIEFFAGAENDLLKRTENISDDEKPEVYIGGLCAKGAHGIDSTSSNYAPFNAVNAKNVASSLD
VAKQVFISKEQLLEWNPEIIFIDTGSYALIKEDYEKNSEYYESLDAFKNGKVYTQFPYNYYTTNYDTALANAYYIGKIVY
PERFSDINIEEKSDEIYEFLVSKAVYSEMAENYCGFENINFSNQ

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 23545; Mature: 23545

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEFTWKIIQREERAQEVIEFFAGAENDLLKRTENISDDEKPEVYIGGLCAKGAHGIDST
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCEECCCCCCCCCC
SSNYAPFNAVNAKNVASSLDVAKQVFISKEQLLEWNPEIIFIDTGSYALIKEDYEKNSEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCEEEEHHHHHCCHHH
YESLDAFKNGKVYTQFPYNYYTTNYDTALANAYYIGKIVYPERFSDINIEEKSDEIYEFL
HHHHHHHCCCCEEEECCCCEEECCCCHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHH
VSKAVYSEMAENYCGFENINFSNQ
HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFEFTWKIIQREERAQEVIEFFAGAENDLLKRTENISDDEKPEVYIGGLCAKGAHGIDST
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCEECCCCCCCCCC
SSNYAPFNAVNAKNVASSLDVAKQVFISKEQLLEWNPEIIFIDTGSYALIKEDYEKNSEY
CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCEEEEHHHHHCCHHH
YESLDAFKNGKVYTQFPYNYYTTNYDTALANAYYIGKIVYPERFSDINIEEKSDEIYEFL
HHHHHHHCCCCEEEECCCCEEECCCCHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHH
VSKAVYSEMAENYCGFENINFSNQ
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]