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The map label for this gene is ybbK [C]

Identifier: 45358599

GI number: 45358599

Start: 1029626

End: 1030432

Strand: Direct

Name: ybbK [C]

Synonym: MMP1036

Alternate gene names: 45358599

Gene position: 1029626-1030432 (Clockwise)

Preceding gene: 45358598

Following gene: 45358600

Centisome position: 61.98

GC content: 34.57

Gene sequence:

>807_bases
ATGTCTTTTTGGCTTAATTTGTTATTAGGTATATTTTTGCTGGTATTAATAATAAAATCGGTTATTATCGTAAACCAGTT
TGAACTCGGACTTATATTCAGGCTTGGAAAAGTTAGGGGAAGATTAAATCCAGGAGTTAATTTCATAATTCCATTTATTG
ATGTACCGATAAAAGTGGATGTAAGAACTAAAGTAATCGATGTTCCGCCACAAGAAATGATTACAAGAGATAACGCAGGA
GTTAGAATCGATGCAGTTATTTACTACCGAGTAATGGATGTAAACAGAGCAATTTTAGAGGTTCAAAACTTCCAGTACGC
AATTATAAACCTTGCACAAACATCACTCAGGGCAATAATTGGTAGCCTCGAACTTGATGATGCGTTAAACAAAAGAGAAT
TTATCAATTCACAGCTTTTAGAAACGCTTGATAGGGATACTGATGCATGGGGTGTAAAGGTTGAAAAAGTTGAATTGAGA
GAAATTGAACCTCCAACCGACATTAAAAACGCAATGACCCAACAGATGAAAGCTGAAAGGTTAAAAAGAGCTGCCATATT
GGAAGCAGAGGGTGAAAAACAGAGTAAAATCTTAAAAGCCCAAGGTACTGCTGAAAGTATGAAAATTGAAGCAGAAGGTC
AGGCAAAAGCAATACAAATCGTTGCAGAATCTGCTCAAAACTACTTTAAAAACGAAGCTCAGCTCTACAAAGCTCTTGAT
GTAACATCAAACACATTAAAAGATAACACCAAGTTTGTAATTTCCGAAAATATAATGGATGTTGCAAAAAAATTCATTAA
ACAATAA

Upstream 100 bases:

>100_bases
TCAAAAGTAATTGTTGTAGGTATTGAAGGAGTATCTTTAATTATTGAAGAACTAAATGAATGATTATAATTCATAAAAAC
CTAAAATTAGGGGGAGATTT

Downstream 100 bases:

>100_bases
ATAATTCTTTTTTAAATATTTCAAATTCTTATTCTTTTTTTAATTTTGGCAATTTAAAAGCTTTAAAGTGGAGAAATTTA
TATGAATGTAACAATCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRTKVIDVPPQEMITRDNAG
VRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELR
EIEPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALD
VTSNTLKDNTKFVISENIMDVAKKFIKQ

Sequences:

>Translated_268_residues
MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRTKVIDVPPQEMITRDNAG
VRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELR
EIEPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALD
VTSNTLKDNTKFVISENIMDVAKKFIKQ
>Mature_267_residues
SFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRTKVIDVPPQEMITRDNAGV
RIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELRE
IEPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALDV
TSNTLKDNTKFVISENIMDVAKKFIKQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=201, Percent_Identity=35.8208955223881, Blast_Score=138, Evalue=4e-33,
Organism=Homo sapiens, GI38016911, Length=180, Percent_Identity=41.6666666666667, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI221316744, Length=198, Percent_Identity=36.3636363636364, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI21686995, Length=202, Percent_Identity=36.1386138613861, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI7657615, Length=184, Percent_Identity=28.2608695652174, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI20149563, Length=231, Percent_Identity=26.8398268398268, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1786697, Length=229, Percent_Identity=42.7947598253275, Blast_Score=191, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=38.265306122449, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=38.265306122449, Blast_Score=135, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI32564147, Length=225, Percent_Identity=35.5555555555556, Blast_Score=134, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI71987612, Length=213, Percent_Identity=37.5586854460094, Blast_Score=130, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI25153583, Length=208, Percent_Identity=39.9038461538462, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI71987621, Length=213, Percent_Identity=37.5586854460094, Blast_Score=130, Evalue=9e-31,
Organism=Caenorhabditis elegans, GI32566490, Length=180, Percent_Identity=38.3333333333333, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17569499, Length=173, Percent_Identity=39.3063583815029, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17569497, Length=222, Percent_Identity=34.6846846846847, Blast_Score=124, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17570459, Length=206, Percent_Identity=34.4660194174757, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71989948, Length=252, Percent_Identity=34.5238095238095, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71989955, Length=178, Percent_Identity=39.8876404494382, Blast_Score=118, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI193210507, Length=203, Percent_Identity=38.9162561576355, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17570161, Length=203, Percent_Identity=38.9162561576355, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989963, Length=120, Percent_Identity=38.3333333333333, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17542664, Length=172, Percent_Identity=26.7441860465116, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45556022, Length=203, Percent_Identity=39.4088669950739, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24657857, Length=202, Percent_Identity=39.6039603960396, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI281365664, Length=191, Percent_Identity=40.8376963350785, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI62484448, Length=180, Percent_Identity=41.6666666666667, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI62484274, Length=180, Percent_Identity=41.6666666666667, Blast_Score=137, Evalue=8e-33,
Organism=Drosophila melanogaster, GI45550506, Length=196, Percent_Identity=35.2040816326531, Blast_Score=137, Evalue=8e-33,
Organism=Drosophila melanogaster, GI18860517, Length=200, Percent_Identity=39.5, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI21356845, Length=194, Percent_Identity=36.5979381443299, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI28573263, Length=196, Percent_Identity=33.6734693877551, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI281361631, Length=207, Percent_Identity=33.8164251207729, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI281361633, Length=207, Percent_Identity=33.8164251207729, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI281361635, Length=140, Percent_Identity=34.2857142857143, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 30363; Mature: 30232

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVD
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEE
VRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAII
EEEEEECCCHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAER
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
LKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALD
HHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTSNTLKDNTKFVISENIMDVAKKFIKQ
HHHHHHCCCCEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
SFWLNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEE
VRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAII
EEEEEECCCHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GSLELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAER
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
LKRAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALD
HHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTSNTLKDNTKFVISENIMDVAKKFIKQ
HHHHHHCCCCEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]