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The map label for this gene is 45358598

Identifier: 45358598

GI number: 45358598

Start: 1029175

End: 1029588

Strand: Direct

Name: 45358598

Synonym: MMP1035

Alternate gene names: NA

Gene position: 1029175-1029588 (Clockwise)

Preceding gene: 45358597

Following gene: 45358599

Centisome position: 61.96

GC content: 36.47

Gene sequence:

>414_bases
ATGGACTTAGGTTATATAACAATTATAATCGGCATGGGGTTAATACTCCTCGAAGCATTCCTTCCAGGGCTTAATTTCCC
AGTCGCGGGTGTTGCCGTGCTTATTTATGGAATATTCTTACTTTATGCGCCACAATTTGCACTTCCATCAGCAATACTTG
CAGGTTTAATCACTGCATACATCATGAAAAGGTTTGTCTATAAAACCGGTTTAAATGTAAAAATCGGTGCTGAAAACTTA
ATTGGTGAACATGGGGACCTTGTTGATGAAATTGATGAAAATAACTACGGCCATGTCATAATACACGGGGAAAAATGGCA
GGCAAAATCTGAAAACCCGATAAAAAAAGGTTCAAAAGTAATTGTTGTAGGTATTGAAGGAGTATCTTTAATTATTGAAG
AACTAAATGAATGA

Upstream 100 bases:

>100_bases
TCGATAAAATTCCAGATATTATACAATAAACTATATATTGTTCTTAGCAAATAGATTATTTAGTGCACTATATAAATAAT
CTAATCTTTAAAGGTGTATC

Downstream 100 bases:

>100_bases
TTATAATTCATAAAAACCTAAAATTAGGGGGAGATTTATGTCTTTTTGGCTTAATTTGTTATTAGGTATATTTTTGCTGG
TATTAATAATAAAATCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MDLGYITIIIGMGLILLEAFLPGLNFPVAGVAVLIYGIFLLYAPQFALPSAILAGLITAYIMKRFVYKTGLNVKIGAENL
IGEHGDLVDEIDENNYGHVIIHGEKWQAKSENPIKKGSKVIVVGIEGVSLIIEELNE

Sequences:

>Translated_137_residues
MDLGYITIIIGMGLILLEAFLPGLNFPVAGVAVLIYGIFLLYAPQFALPSAILAGLITAYIMKRFVYKTGLNVKIGAENL
IGEHGDLVDEIDENNYGHVIIHGEKWQAKSENPIKKGSKVIVVGIEGVSLIIEELNE
>Mature_137_residues
MDLGYITIIIGMGLILLEAFLPGLNFPVAGVAVLIYGIFLLYAPQFALPSAILAGLITAYIMKRFVYKTGLNVKIGAENL
IGEHGDLVDEIDENNYGHVIIHGEKWQAKSENPIKKGSKVIVVGIEGVSLIIEELNE

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 14880; Mature: 14880

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGYITIIIGMGLILLEAFLPGLNFPVAGVAVLIYGIFLLYAPQFALPSAILAGLITAY
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IMKRFVYKTGLNVKIGAENLIGEHGDLVDEIDENNYGHVIIHGEKWQAKSENPIKKGSKV
HHHHHHHHCCCCEEECHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE
IVVGIEGVSLIIEELNE
EEEECCHHHHHHHHHCC
>Mature Secondary Structure
MDLGYITIIIGMGLILLEAFLPGLNFPVAGVAVLIYGIFLLYAPQFALPSAILAGLITAY
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IMKRFVYKTGLNVKIGAENLIGEHGDLVDEIDENNYGHVIIHGEKWQAKSENPIKKGSKV
HHHHHHHHCCCCEEECHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE
IVVGIEGVSLIIEELNE
EEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]