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The map label for this gene is dedA [C]

Identifier: 45358472

GI number: 45358472

Start: 901906

End: 902388

Strand: Direct

Name: dedA [C]

Synonym: MMP0909

Alternate gene names: 45358472

Gene position: 901906-902388 (Clockwise)

Preceding gene: 45358471

Following gene: 45358478

Centisome position: 54.29

GC content: 36.02

Gene sequence:

>483_bases
ATGGATTTTTACCAATTTGCAGAATATATTGTACTTAACTATGGATATTTCGGAATATTTTTAATTGCATTTACTGAGGC
AGTTATCCAGCCAATTCTACCAGATATATTTATTATTGGCGCATCGGCTTTCGGATTAGATTCCGTAACGTGCGCCCTTG
TAGCTTCTTTTGGATCACTTACTGGCGGATATACGGGCTATTTTCTTGGAAAAAAACTTGGAACAAATGTATTTTTGAAA
ATTTTCAAAGAAAAATATTTTATCAAAGGAAAAGCATTTTTTGAAAAATTTGGTGTATGGGGCGTTGCAATTGCAGGTTT
TACCCCGATTCCGTACAAGGTTTTTGCATGGCTTGCAGGAATATTCAAAATGAATCTTGTTTCATTTGGTGCGGGAACAC
TTCTTGGAAGGATTCCCAGGTTTTTACTTGTAGCCTATTTTGGATACAGTTTAGGACTGTTATTTGGCCTTCACACACCC
TAA

Upstream 100 bases:

>100_bases
CTGGCCTTTTGGTAATCGATGAACAAAAAAATGCAGTTGGAGTTATATCTCAAACGGACATACTTCGAGCACTCGTTAAA
GGATAAAAATAAGGTGTATT

Downstream 100 bases:

>100_bases
TTTACTTAAAAAATGATTTAAAAAAATAATTTAAATTATTACATTCCTAAAATTTCCCTATCTTCGGTATTTTCAAGCAT
CACCGAGATGTTTAAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDFYQFAEYIVLNYGYFGIFLIAFTEAVIQPILPDIFIIGASAFGLDSVTCALVASFGSLTGGYTGYFLGKKLGTNVFLK
IFKEKYFIKGKAFFEKFGVWGVAIAGFTPIPYKVFAWLAGIFKMNLVSFGAGTLLGRIPRFLLVAYFGYSLGLLFGLHTP

Sequences:

>Translated_160_residues
MDFYQFAEYIVLNYGYFGIFLIAFTEAVIQPILPDIFIIGASAFGLDSVTCALVASFGSLTGGYTGYFLGKKLGTNVFLK
IFKEKYFIKGKAFFEKFGVWGVAIAGFTPIPYKVFAWLAGIFKMNLVSFGAGTLLGRIPRFLLVAYFGYSLGLLFGLHTP
>Mature_160_residues
MDFYQFAEYIVLNYGYFGIFLIAFTEAVIQPILPDIFIIGASAFGLDSVTCALVASFGSLTGGYTGYFLGKKLGTNVFLK
IFKEKYFIKGKAFFEKFGVWGVAIAGFTPIPYKVFAWLAGIFKMNLVSFGAGTLLGRIPRFLLVAYFGYSLGLLFGLHTP

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326
- InterPro:   IPR015414 [H]

Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 17650; Mature: 17650

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYQFAEYIVLNYGYFGIFLIAFTEAVIQPILPDIFIIGASAFGLDSVTCALVASFGSL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHC
TGGYTGYFLGKKLGTNVFLKIFKEKYFIKGKAFFEKFGVWGVAIAGFTPIPYKVFAWLAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHH
IFKMNLVSFGAGTLLGRIPRFLLVAYFGYSLGLLFGLHTP
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFYQFAEYIVLNYGYFGIFLIAFTEAVIQPILPDIFIIGASAFGLDSVTCALVASFGSL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHC
TGGYTGYFLGKKLGTNVFLKIFKEKYFIKGKAFFEKFGVWGVAIAGFTPIPYKVFAWLAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHH
IFKMNLVSFGAGTLLGRIPRFLLVAYFGYSLGLLFGLHTP
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]