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The map label for this gene is 45358454

Identifier: 45358454

GI number: 45358454

Start: 884248

End: 884823

Strand: Direct

Name: 45358454

Synonym: MMP0891

Alternate gene names: NA

Gene position: 884248-884823 (Clockwise)

Preceding gene: 45358453

Following gene: 45358456

Centisome position: 53.23

GC content: 35.24

Gene sequence:

>576_bases
ATGTATGTTTTTTTAGATACTGAAACAACGGGACTTCACCCAGGACAGATTGCACAGCTTTCGTATTTGGTAACTGACGA
AGATTTAAACTTAAAAAAAGTTTTTAATCAATACTACTCAGTAGACCACATGTCAAGAAGTGCTGCAAAAGTTCACGGCC
TTACAGTGGAAATACTTGACGAATTATCAAATGGAATGACTTTTGAAGACACTGTCGATGAAGTAAGGGATGATCTTGAA
GATTCTGTAATAATCGGGCACAATATCTCTTTTGATATACGGTTTTTAAAAGCAGAGTTTGAAAGACTCGGTCCAGAATA
TGTTCCAAAAGATAAATTCTGTACGATGTTTCATTTTACCCCAATCTGTAAACTTCCAGGTCAGAAAAGATATAAAAGAC
CAAAATTAGTTGAATTAATGGAATTTTTAGAACAGTGTCCCAATGAGGGACTTGAATTTACAAAAAAAGCGTATGGCTGT
AGTGACGTTGGATTTCACGATGCAAGGTACGATACCGGGATATTATACCTCTGCTACAAAAAAGGCGTTCTGATGAACCA
TATAAAAAAAGATTAA

Upstream 100 bases:

>100_bases
TATTCTTTAATTAGATATAAAGCTTAAATAACCTGATATATATAGTTGAGTTATCTTGAAAGATAAATTATTGAAAATTT
AAAATTAAAACGTGTTAAAG

Downstream 100 bases:

>100_bases
ATTTCATTTAATTAGTTCTTTTTTCAATTTTTAAAAGTCCATTCATCTTTTAAAATGCTGTAAACTTCTGCATCAATAAA
TTTTCCATTTAATAGTTCTG

Product: exonuclease

Products: NA

Alternate protein names: Exonuclease; DNA Polymerase III Epsilon Subunit

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILDELSNGMTFEDTVDEVRDDLE
DSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHFTPICKLPGQKRYKRPKLVELMEFLEQCPNEGLEFTKKAYGC
SDVGFHDARYDTGILYLCYKKGVLMNHIKKD

Sequences:

>Translated_191_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILDELSNGMTFEDTVDEVRDDLE
DSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHFTPICKLPGQKRYKRPKLVELMEFLEQCPNEGLEFTKKAYGC
SDVGFHDARYDTGILYLCYKKGVLMNHIKKD
>Mature_191_residues
MYVFLDTETTGLHPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILDELSNGMTFEDTVDEVRDDLE
DSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHFTPICKLPGQKRYKRPKLVELMEFLEQCPNEGLEFTKKAYGC
SDVGFHDARYDTGILYLCYKKGVLMNHIKKD

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22097; Mature: 22097

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVFLDTETTGLHPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILD
CEEEEECCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHFT
HHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEECC
PICKLPGQKRYKRPKLVELMEFLEQCPNEGLEFTKKAYGCSDVGFHDARYDTGILYLCYK
HHHCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
KGVLMNHIKKD
CCHHHHHHCCC
>Mature Secondary Structure
MYVFLDTETTGLHPGQIAQLSYLVTDEDLNLKKVFNQYYSVDHMSRSAAKVHGLTVEILD
CEEEEECCCCCCCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYVPKDKFCTMFHFT
HHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEECC
PICKLPGQKRYKRPKLVELMEFLEQCPNEGLEFTKKAYGCSDVGFHDARYDTGILYLCYK
HHHCCCCHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
KGVLMNHIKKD
CCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA