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The map label for this gene is slpB [H]

Identifier: 45358438

GI number: 45358438

Start: 867911

End: 869512

Strand: Direct

Name: slpB [H]

Synonym: MMP0875

Alternate gene names: 45358438

Gene position: 867911-869512 (Clockwise)

Preceding gene: 45358436

Following gene: 45358441

Centisome position: 52.25

GC content: 34.08

Gene sequence:

>1602_bases
ATGGCAATTAGTATTAAAAAAATAGTTAGCATCGGTTTAGGTGGCTTGATGCTCGGTTCAACATTTTGTTCAGGTGCTTT
TGCAGTAGAAAAAGTTGGGGATGTAGATTCTTTTGTTTCAGACATTGTTTCAGGGAATAATTCAAATATTGATATTATTG
TTGGTTCAAATTCAGTAGCCTCAGATGTTGTATCGGCTGCTAATATCGCGGCAAAAATTGGATCATTATCCTTTTTAGAA
CAGAATGGGAAAAGTGCTGCTGCAACCTTATCAATTGCTTCAAAATCTAAGTCTGAAGAATTTAATTTAATTGGTTCAGG
AGTTACGGATTCACTTTTCGCAGTTTCCGCAGATGATGACTATTTATCTATTATCACAAATGCAGATTTTCATAGTTCAA
CTAATTTGGATGCAACAGGATACGTTTCACTTGAAGATTTAGGTAATTTAATGGAAATATCAGATACTGACCCTTCAAGT
TGGTTTACTGGATCAGATAATGATGTTTCCGCAGAATTTCTGTTTTTAAGACTTAAATCAGATGCGACAAATTGGAAAGT
AAATTCTGATGAAATGTCATATATGGCATTATTATTGGATGAAAATCTTGGGGTTCCAGGAGGTTTAAAATGCATGTCTC
CCGGGCGTAATATTGTATATTTGGGCGAAGAATGGACCTTAATGGGCATGAATGCTGATGCAGATAAAGTTAGCATGGGG
AAAGAAGTTTATCGTGGCACATTAAAAGAAGGGAAATCTTATTTTGTAAATGGTTACGAGATAAAAATCGATTCGATTAT
AACCGACAGCACTAATTATAAGGTAAGTGCAAAAATATTAAAAGATGGTACGGTTGTAAAATCGGCATATGATACAGCAC
CGTTAAACCTTATTTCGAACGGCATTGGAATAAGATTTCAAAAAGTTTACGAAAGTATTGATTCAAATGCGGCATATGCG
GATGTTGTAATCGTGAACAGTGTAAAAGGAATGGAATTGGGTTCGGAAGTAATTCCCGATTATGAAATTTACTCTGTTTT
ATATACTGGAGGTACTTTTCGGTACACTGATGATTTTTTAAAGGGTCAAAAAAATATGGGTCTTGCTTTAAAATATGTTG
GAGATGACTTGACAGGTTTAGGTTCTGATGATACTGTTGAAATTGCAAATTATGCAAATTTCTTGTTTGATGATGAAGGA
AAGAGTGCAACTACATTAAGTGTATTCTTCGAAATGAACGAGGAAAAAGAAGTCAGTATAATTCAAAATCAAAAAGCAAA
AGTTTTAAATGTGGAAGTTATCGCAGACAAAATATCTGCTGAAAGTGAACAATCAACAATATTAAATGCTCCAGTTGTTA
AGTTAGATACTGAAACGTCAATGGAATCTTCAGAAAATCCATTAATATTAGTTGGCGGACCTGTTGTAAATTCAATAACT
GAAGAATTAGTAAATGCAGGATTATTTGCAATTGATGATGATAGCCTTGCAACTTTAGCAGTGGTTTCTGAAACTGCAAA
TGGAAATGATGTTTTAATTGTTACAGGTGGAGATAGGGATGCAACAGCAGAAGCTGCAAATGCTTTAATTGCAATGATTT
AA

Upstream 100 bases:

>100_bases
TATAAAGGTGAAACTAGAGGCGCGCATAATCACAATAACTGAGAGACTTATTAAATTCCAGATAATTTATTTTTAAAAAA
TTAAATAAACAGGTGAATAA

Downstream 100 bases:

>100_bases
AAAAGTAAATTATTTTTTAATTTTTTCTAAAATTTTTTTATCAACCCATTCTTCTGTAATATATTTTTCATAAACTGGAA
GCCTTTCTTTTAAAGTAAAT

Product: S layer protein

Products: NA

Alternate protein names: Cell surface glycoprotein; Surface layer protein [H]

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MAISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVASDVVSAANIAAKIGSLSFLE
QNGKSAAATLSIASKSKSEEFNLIGSGVTDSLFAVSADDDYLSIITNADFHSSTNLDATGYVSLEDLGNLMEISDTDPSS
WFTGSDNDVSAEFLFLRLKSDATNWKVNSDEMSYMALLLDENLGVPGGLKCMSPGRNIVYLGEEWTLMGMNADADKVSMG
KEVYRGTLKEGKSYFVNGYEIKIDSIITDSTNYKVSAKILKDGTVVKSAYDTAPLNLISNGIGIRFQKVYESIDSNAAYA
DVVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFLKGQKNMGLALKYVGDDLTGLGSDDTVEIANYANFLFDDEG
KSATTLSVFFEMNEEKEVSIIQNQKAKVLNVEVIADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSIT
EELVNAGLFAIDDDSLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI

Sequences:

>Translated_533_residues
MAISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVASDVVSAANIAAKIGSLSFLE
QNGKSAAATLSIASKSKSEEFNLIGSGVTDSLFAVSADDDYLSIITNADFHSSTNLDATGYVSLEDLGNLMEISDTDPSS
WFTGSDNDVSAEFLFLRLKSDATNWKVNSDEMSYMALLLDENLGVPGGLKCMSPGRNIVYLGEEWTLMGMNADADKVSMG
KEVYRGTLKEGKSYFVNGYEIKIDSIITDSTNYKVSAKILKDGTVVKSAYDTAPLNLISNGIGIRFQKVYESIDSNAAYA
DVVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFLKGQKNMGLALKYVGDDLTGLGSDDTVEIANYANFLFDDEG
KSATTLSVFFEMNEEKEVSIIQNQKAKVLNVEVIADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSIT
EELVNAGLFAIDDDSLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI
>Mature_532_residues
AISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVASDVVSAANIAAKIGSLSFLEQ
NGKSAAATLSIASKSKSEEFNLIGSGVTDSLFAVSADDDYLSIITNADFHSSTNLDATGYVSLEDLGNLMEISDTDPSSW
FTGSDNDVSAEFLFLRLKSDATNWKVNSDEMSYMALLLDENLGVPGGLKCMSPGRNIVYLGEEWTLMGMNADADKVSMGK
EVYRGTLKEGKSYFVNGYEIKIDSIITDSTNYKVSAKILKDGTVVKSAYDTAPLNLISNGIGIRFQKVYESIDSNAAYAD
VVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFLKGQKNMGLALKYVGDDLTGLGSDDTVEIANYANFLFDDEGK
SATTLSVFFEMNEEKEVSIIQNQKAKVLNVEVIADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSITE
ELVNAGLFAIDDDSLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mj S-layer protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022651
- InterPro:   IPR006454
- InterPro:   IPR022650 [H]

Pfam domain/function: PF05124 S_layer_C; PF05123 S_layer_N [H]

EC number: NA

Molecular weight: Translated: 56645; Mature: 56514

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVA
CCEEHHHHHHHCCCHHHHHHHHCCCCEEHHHCCCHHHHHHHHHCCCCCCEEEEECCCHHH
SDVVSAANIAAKIGSLSFLEQNGKSAAATLSIASKSKSEEFNLIGSGVTDSLFAVSADDD
HHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCC
YLSIITNADFHSSTNLDATGYVSLEDLGNLMEISDTDPSSWFTGSDNDVSAEFLFLRLKS
EEEEEECCCCCCCCCCCCEEEEEHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEC
DATNWKVNSDEMSYMALLLDENLGVPGGLKCMSPGRNIVYLGEEWTLMGMNADADKVSMG
CCCCEEECCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCCEEEEECCCCCHHHHHC
KEVYRGTLKEGKSYFVNGYEIKIDSIITDSTNYKVSAKILKDGTVVKSAYDTAPLNLISN
HHHHHHHHHCCCEEEECCEEEEEEEEEECCCCCEEEEEEEECCEEEECCCCCCCHHHHCC
GIGIRFQKVYESIDSNAAYADVVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFL
CCCEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEEEECCEEEECHHHH
KGQKNMGLALKYVGDDLTGLGSDDTVEIANYANFLFDDEGKSATTLSVFFEMNEEKEVSI
CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEEEEECCCCCEEE
IQNQKAKVLNVEVIADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSIT
EECCCCEEEEEEEEEEHHCCCCCCCEEECCCEEEEECCCCCCCCCCCEEEECCHHHHHHH
EELVNAGLFAIDDDSLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI
HHHHHCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHCEEEEEC
>Mature Secondary Structure 
AISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVA
CEEHHHHHHHCCCHHHHHHHHCCCCEEHHHCCCHHHHHHHHHCCCCCCEEEEECCCHHH
SDVVSAANIAAKIGSLSFLEQNGKSAAATLSIASKSKSEEFNLIGSGVTDSLFAVSADDD
HHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEECCCC
YLSIITNADFHSSTNLDATGYVSLEDLGNLMEISDTDPSSWFTGSDNDVSAEFLFLRLKS
EEEEEECCCCCCCCCCCCEEEEEHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEEC
DATNWKVNSDEMSYMALLLDENLGVPGGLKCMSPGRNIVYLGEEWTLMGMNADADKVSMG
CCCCEEECCCCCEEEEEEEECCCCCCCCCEEECCCCCEEEECCCEEEEECCCCCHHHHHC
KEVYRGTLKEGKSYFVNGYEIKIDSIITDSTNYKVSAKILKDGTVVKSAYDTAPLNLISN
HHHHHHHHHCCCEEEECCEEEEEEEEEECCCCCEEEEEEEECCEEEECCCCCCCHHHHCC
GIGIRFQKVYESIDSNAAYADVVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFL
CCCEEHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHCCCCEEEEEEEECCEEEECHHHH
KGQKNMGLALKYVGDDLTGLGSDDTVEIANYANFLFDDEGKSATTLSVFFEMNEEKEVSI
CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEEEEECCCCCEEE
IQNQKAKVLNVEVIADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSIT
EECCCCEEEEEEEEEEHHCCCCCCCEEECCCEEEEECCCCCCCCCCCEEEECCHHHHHHH
EELVNAGLFAIDDDSLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI
HHHHHCCEEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 12382110 [H]