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The map label for this gene is rnp2

Identifier: 45358441

GI number: 45358441

Start: 871531

End: 871923

Strand: Direct

Name: rnp2

Synonym: MMP0878

Alternate gene names: 45358441

Gene position: 871531-871923 (Clockwise)

Preceding gene: 45358438

Following gene: 45358445

Centisome position: 52.47

GC content: 34.86

Gene sequence:

>393_bases
ATGTTAAAAACACTACCTCCAACGTTAAGAGAAAAAAAACGATACGTCGCACTTGAGATTATTTATGAGATGGAACTATC
TCAAAAAGACGTAATATCAGTTGTTAGAAATGCGCTATTAAACTATTCTGGAGTTTTGGGCTGTTCCCGAACAAATCCGT
GGTTAATTGATTACGGCCACCCGTATGGAATACTTCGAATTTCACGAGAAGAAGTCGATACTTTAAGAAGTTCGCTAAGT
TTAATGGGTGAACACAAAAAAAAGCCAATAAACATACGAATAATTGGAATTTCAAACTCGGTAAAACACATTCGTGAGAA
ATTTTTGCACGTGCCCCACGAACCATACTATAAAGTTATACAAAAATTAAAAAGAAAAGGCCCAAAAAAGTAA

Upstream 100 bases:

>100_bases
ATTTTTCAACACAATAATCACCAAGTTTTTATAACTGGCCCAATTATTATAAATATTGCGTTTATTATTTTTATTTTAGT
ATATATAGGGGAAATATAAG

Downstream 100 bases:

>100_bases
TTATCTTAGGATTCTGAGGTAGTTACCCAAAACCAAAAAGTACTCCATACAGAGATTCCAACAACGGCTAAAGATATGAA
TATAGTATCATAACAGCCGA

Product: ribonuclease P-like protein

Products: NA

Alternate protein names: RNase P component 2

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLKTLPPTLREKKRYVALEIIYEMELSQKDVISVVRNALLNYSGVLGCSRTNPWLIDYGHPYGILRISREEVDTLRSSLS
LMGEHKKKPINIRIIGISNSVKHIREKFLHVPHEPYYKVIQKLKRKGPKK

Sequences:

>Translated_130_residues
MLKTLPPTLREKKRYVALEIIYEMELSQKDVISVVRNALLNYSGVLGCSRTNPWLIDYGHPYGILRISREEVDTLRSSLS
LMGEHKKKPINIRIIGISNSVKHIREKFLHVPHEPYYKVIQKLKRKGPKK
>Mature_130_residues
MLKTLPPTLREKKRYVALEIIYEMELSQKDVISVVRNALLNYSGVLGCSRTNPWLIDYGHPYGILRISREEVDTLRSSLS
LMGEHKKKPINIRIIGISNSVKHIREKFLHVPHEPYYKVIQKLKRKGPKK

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1369

COG function: function code J; RNase P/RNase MRP subunit POP5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP2_METMP (P60780)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_987998.1
- ProteinModelPortal:   P60780
- SMR:   P60780
- GeneID:   2762695
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP0878
- NMPDR:   fig|267377.1.peg.878
- HOGENOM:   HBG551631
- OMA:   LKTLPPT
- ProtClustDB:   CLSK2517616
- BioCyc:   MMAR267377:MMP0878-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00755
- InterPro:   IPR002759
- InterPro:   IPR016434
- PIRSF:   PIRSF004952

Pfam domain/function: PF01900 RNase_P_Rpp14

EC number: =3.1.26.5

Molecular weight: Translated: 15149; Mature: 15149

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLPPTLREKKRYVALEIIYEMELSQKDVISVVRNALLNYSGVLGCSRTNPWLIDYGH
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCC
PYGILRISREEVDTLRSSLSLMGEHKKKPINIRIIGISNSVKHIREKFLHVPHEPYYKVI
CEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHCCCCCHHHHHH
QKLKRKGPKK
HHHHHCCCCC
>Mature Secondary Structure
MLKTLPPTLREKKRYVALEIIYEMELSQKDVISVVRNALLNYSGVLGCSRTNPWLIDYGH
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCC
PYGILRISREEVDTLRSSLSLMGEHKKKPINIRIIGISNSVKHIREKFLHVPHEPYYKVI
CEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHCCCCCHHHHHH
QKLKRKGPKK
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA