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The map label for this gene is NifI1

Identifier: 45358417

GI number: 45358417

Start: 844960

End: 845277

Strand: Direct

Name: NifI1

Synonym: MMP0854

Alternate gene names: 45358417

Gene position: 844960-845277 (Clockwise)

Preceding gene: 45358416

Following gene: 45358418

Centisome position: 50.87

GC content: 38.05

Gene sequence:

>318_bases
ATGAAAATGATTAGAGCAGTAGTCAGACCAAGTAAAGCAGAAGAAGTTGTAGATGCACTCGCTGAATCCGGATGCGTAGC
TTTGACAAAAATGGACGTTATTGGAAGAGGAAAACAAAAAGGAATTAAGATTGACCAGATTTACTACGATGAACTTCCAA
AAACAATGCTCATGCTCGTAGTTGAAGACGATGCAGCAGAAAATGTAATTGAATTGATTACAAAAACTGCATACACGGGA
AGCTTTGGTGACGGTAAGATATTCGTAAGTCCTGTAGATGAAGCATACACAGTTAGAACAAGATCATGCGGATTATAA

Upstream 100 bases:

>100_bases
CCCAATGACAATGGACGAATTAGAAGAATTAACTTCAAAATACGGATTCTTAGATTAAATAAAGTAAATTACTTACCTTA
AATTTTTAAGAGGGCAAAAA

Downstream 100 bases:

>100_bases
GGTGATTATATGAAAGAGATAATCGCAATAATTCGGCCAAGCAAAATGGCACAAACAAAAACTGTCCTTGAAGGCCTTGG
ATTTCCAGCAATGACTGCGA

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKMIRAVVRPSKAEEVVDALAESGCVALTKMDVIGRGKQKGIKIDQIYYDELPKTMLMLVVEDDAAENVIELITKTAYTG
SFGDGKIFVSPVDEAYTVRTRSCGL

Sequences:

>Translated_105_residues
MKMIRAVVRPSKAEEVVDALAESGCVALTKMDVIGRGKQKGIKIDQIYYDELPKTMLMLVVEDDAAENVIELITKTAYTG
SFGDGKIFVSPVDEAYTVRTRSCGL
>Mature_105_residues
MKMIRAVVRPSKAEEVVDALAESGCVALTKMDVIGRGKQKGIKIDQIYYDELPKTMLMLVVEDDAAENVIELITKTAYTG
SFGDGKIFVSPVDEAYTVRTRSCGL

Specific function: Could be involved in the regulation of nitrogen fixation

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family

Homologues:

Organism=Escherichia coli, GI1786655, Length=104, Percent_Identity=36.5384615384615, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1788904, Length=104, Percent_Identity=40.3846153846154, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLNB1_METMP (P71524)

Other databases:

- EMBL:   U75887
- EMBL:   BX950229
- PIR:   T10091
- RefSeq:   NP_987974.1
- ProteinModelPortal:   P71524
- SMR:   P71524
- GeneID:   2762306
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP0854
- NMPDR:   fig|267377.1.peg.854
- HOGENOM:   HBG748089
- OMA:   IHYDELP
- ProtClustDB:   CLSK878512
- BioCyc:   MMAR267377:MMP0854-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- Gene3D:   G3DSA:3.30.70.120
- PRINTS:   PR00340
- SMART:   SM00938

Pfam domain/function: PF00543 P-II; SSF54913 N-reg_PII-like_a/b

EC number: NA

Molecular weight: Translated: 11504; Mature: 11504

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS00638 PII_GLNB_CTER; PS51343 PII_GLNB_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMIRAVVRPSKAEEVVDALAESGCVALTKMDVIGRGKQKGIKIDQIYYDELPKTMLMLV
CCHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCCEEEHHHHHHHCCCEEEEEE
VEDDAAENVIELITKTAYTGSFGDGKIFVSPVDEAYTVRTRSCGL
ECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MKMIRAVVRPSKAEEVVDALAESGCVALTKMDVIGRGKQKGIKIDQIYYDELPKTMLMLV
CCHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCCEEEHHHHHHHCCCEEEEEE
VEDDAAENVIELITKTAYTGSFGDGKIFVSPVDEAYTVRTRSCGL
ECCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990309