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The map label for this gene is 45358152

Identifier: 45358152

GI number: 45358152

Start: 585757

End: 587331

Strand: Direct

Name: 45358152

Synonym: MMP0589

Alternate gene names: NA

Gene position: 585757-587331 (Clockwise)

Preceding gene: 45358151

Following gene: 45358159

Centisome position: 35.26

GC content: 32.83

Gene sequence:

>1575_bases
ATGCATTATAACTCAAATCTCAATTTTAAAAAAGGGAATTTTATGAAATTTTTAATTCTTGATGGATACACGGATGAACC
CGCAGGACTTGGAGTTCCACCTTATATTGGAATGTATCCAAGATATGCGGCAGGAGTTCTTTACAAATTTAAACACGACG
TTGATTATATCACAATCGATAAATTGCGAGAAGAACTTAAAAAAGGATATGATTTTAATAGATATGATGTAGTTATTGCG
ATATGTGGGTTTCACACCCCTGGAAAGTATTTAAATGCAAACCCTGCAACATTGAGAGAATTTGTATCGATTTTGTATAA
TTTTAAAGGTTTAAAGATATTGGGTGGCCCTGTTGCAACTAAATTTGGTTCATCCCTTGAGGGCGGAAAAATAAAAGATG
AATCAAATTTGAAATATTTCTTTGATGTGATTTCTGAAGGCGATTTAGATGCTGTTTTACACGATCTTTTAAAAAACAAT
TTTAAACCTGAAAAAACAGATGGAACAAGGCTTAGGACGTATGATGAACTTGATGAATTTGCGAGAATTGGGGCAAAAAT
TGTAAAACTTCATCCAAACTATCCAAATATTATTGCAGAAATTGAGACATATCGAGGTTGTACAAGGGCATTTAGTGGAG
GATGCAGTTTTTGCACAGAACCAAGACGATATGGGTCCCCAAAATTTAGAAATTCGAGAGATATAATTGAAGAAGTAAGA
AATCTCTATGAAAATGGAATTAAATACTTTAGAATTGGAAGACAGCCCTGCATGTTTTCGTACATGGCAAAAGATGTAGA
AACAACAGATGTTCCAGTTCCGAATGTTTTAGAGATAGAAAAACTCTTTAATGGGATAACTTCAGTTTCAAAACCCAGTG
TTTTACACATTGACAATGCAAACCCTTCCGTTATTGCAAGACATGAAAAAGAGGGGCGAGAAATTGCAAAAATACTTGTA
AGACACTGTACTTCCGGAAATGTTGCAGCTTTCGGGGTAGAAAGTTTCGATGAAAAAGTTATTTCAAAAAACTGTCTTTT
AACTGAACCAGAAGATGTTTTAAAAGCTGTTAATATTTTAAATGAAATTGGCGGAAAAAGAGGAGAAAATGGAATGCCTT
ATCTTCTTCCCGGAATAAATTTACTTTCCGGATTAAAAGGGGAATCAAACGATACTTTTGAAATAAATTATGATTATTTA
AAAGAAATATATGATTCAGGAAATATACTTAGGCGGATAAATATAAGGCAGGTAGTTCCATTTTTTGGAACTGATATAAC
AGTTAAAGATGTTGAAAAAGCAAGAAAACGAAAAAATCTATTTTTGAAGTTCAAAGAAAAAATAAGGACTGAAATAGACA
ACCCAATGTTAAAAAGGATGCTCCCAACAGAAACGATATTAAAAAATGTGATAGTTGAAGTTAAAGAGAAAAATGATCTT
TATTTTGGAAGGCAGTTTGGAAGCTACCCAATATTGATAGGAGTTGCTGAAAAAAACGTGGAAATTGGAAAATTTGTCGA
TATACGAGTAACTGGCTATGGGAGAAGGTCCATAACTGGAAAAATAGTAAAATAA

Upstream 100 bases:

>100_bases
ATCATTAAACGAAAGTTTAATTCAGAGCTGGTTATTTTCATCACAGACCGTAACTTAAAAAAGATTTTTTAAACATCTTT
TATATATCTAATTTAAACAT

Downstream 100 bases:

>100_bases
CGAGTTAGTGTTTTGATAATACATATTTTGCAACTTCTTTTACAACATCCAGTATCTTTTTTGTAGTAATGTATGAAATT
GCATCGTTGTGGTAGTCAAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MHYNSNLNFKKGNFMKFLILDGYTDEPAGLGVPPYIGMYPRYAAGVLYKFKHDVDYITIDKLREELKKGYDFNRYDVVIA
ICGFHTPGKYLNANPATLREFVSILYNFKGLKILGGPVATKFGSSLEGGKIKDESNLKYFFDVISEGDLDAVLHDLLKNN
FKPEKTDGTRLRTYDELDEFARIGAKIVKLHPNYPNIIAEIETYRGCTRAFSGGCSFCTEPRRYGSPKFRNSRDIIEEVR
NLYENGIKYFRIGRQPCMFSYMAKDVETTDVPVPNVLEIEKLFNGITSVSKPSVLHIDNANPSVIARHEKEGREIAKILV
RHCTSGNVAAFGVESFDEKVISKNCLLTEPEDVLKAVNILNEIGGKRGENGMPYLLPGINLLSGLKGESNDTFEINYDYL
KEIYDSGNILRRINIRQVVPFFGTDITVKDVEKARKRKNLFLKFKEKIRTEIDNPMLKRMLPTETILKNVIVEVKEKNDL
YFGRQFGSYPILIGVAEKNVEIGKFVDIRVTGYGRRSITGKIVK

Sequences:

>Translated_524_residues
MHYNSNLNFKKGNFMKFLILDGYTDEPAGLGVPPYIGMYPRYAAGVLYKFKHDVDYITIDKLREELKKGYDFNRYDVVIA
ICGFHTPGKYLNANPATLREFVSILYNFKGLKILGGPVATKFGSSLEGGKIKDESNLKYFFDVISEGDLDAVLHDLLKNN
FKPEKTDGTRLRTYDELDEFARIGAKIVKLHPNYPNIIAEIETYRGCTRAFSGGCSFCTEPRRYGSPKFRNSRDIIEEVR
NLYENGIKYFRIGRQPCMFSYMAKDVETTDVPVPNVLEIEKLFNGITSVSKPSVLHIDNANPSVIARHEKEGREIAKILV
RHCTSGNVAAFGVESFDEKVISKNCLLTEPEDVLKAVNILNEIGGKRGENGMPYLLPGINLLSGLKGESNDTFEINYDYL
KEIYDSGNILRRINIRQVVPFFGTDITVKDVEKARKRKNLFLKFKEKIRTEIDNPMLKRMLPTETILKNVIVEVKEKNDL
YFGRQFGSYPILIGVAEKNVEIGKFVDIRVTGYGRRSITGKIVK
>Mature_524_residues
MHYNSNLNFKKGNFMKFLILDGYTDEPAGLGVPPYIGMYPRYAAGVLYKFKHDVDYITIDKLREELKKGYDFNRYDVVIA
ICGFHTPGKYLNANPATLREFVSILYNFKGLKILGGPVATKFGSSLEGGKIKDESNLKYFFDVISEGDLDAVLHDLLKNN
FKPEKTDGTRLRTYDELDEFARIGAKIVKLHPNYPNIIAEIETYRGCTRAFSGGCSFCTEPRRYGSPKFRNSRDIIEEVR
NLYENGIKYFRIGRQPCMFSYMAKDVETTDVPVPNVLEIEKLFNGITSVSKPSVLHIDNANPSVIARHEKEGREIAKILV
RHCTSGNVAAFGVESFDEKVISKNCLLTEPEDVLKAVNILNEIGGKRGENGMPYLLPGINLLSGLKGESNDTFEINYDYL
KEIYDSGNILRRINIRQVVPFFGTDITVKDVEKARKRKNLFLKFKEKIRTEIDNPMLKRMLPTETILKNVIVEVKEKNDL
YFGRQFGSYPILIGVAEKNVEIGKFVDIRVTGYGRRSITGKIVK

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59546; Mature: 59546

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYNSNLNFKKGNFMKFLILDGYTDEPAGLGVPPYIGMYPRYAAGVLYKFKHDVDYITID
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEHH
KLREELKKGYDFNRYDVVIAICGFHTPGKYLNANPATLREFVSILYNFKGLKILGGPVAT
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHH
KFGSSLEGGKIKDESNLKYFFDVISEGDLDAVLHDLLKNNFKPEKTDGTRLRTYDELDEF
HCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHH
ARIGAKIVKLHPNYPNIIAEIETYRGCTRAFSGGCSFCTEPRRYGSPKFRNSRDIIEEVR
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHH
NLYENGIKYFRIGRQPCMFSYMAKDVETTDVPVPNVLEIEKLFNGITSVSKPSVLHIDNA
HHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
NPSVIARHEKEGREIAKILVRHCTSGNVAAFGVESFDEKVISKNCLLTEPEDVLKAVNIL
CCCEEECCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NEIGGKRGENGMPYLLPGINLLSGLKGESNDTFEINYDYLKEIYDSGNILRRINIRQVVP
HHHCCCCCCCCCCEEECCHHHHHCCCCCCCCEEEECHHHHHHHHCCCCEEEEECHHHHHH
FFGTDITVKDVEKARKRKNLFLKFKEKIRTEIDNPMLKRMLPTETILKNVIVEVKEKNDL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCE
YFGRQFGSYPILIGVAEKNVEIGKFVDIRVTGYGRRSITGKIVK
EEECCCCCCCEEEEEECCCCEECEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MHYNSNLNFKKGNFMKFLILDGYTDEPAGLGVPPYIGMYPRYAAGVLYKFKHDVDYITID
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEHH
KLREELKKGYDFNRYDVVIAICGFHTPGKYLNANPATLREFVSILYNFKGLKILGGPVAT
HHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHH
KFGSSLEGGKIKDESNLKYFFDVISEGDLDAVLHDLLKNNFKPEKTDGTRLRTYDELDEF
HCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEECCHHHHHHH
ARIGAKIVKLHPNYPNIIAEIETYRGCTRAFSGGCSFCTEPRRYGSPKFRNSRDIIEEVR
HHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHH
NLYENGIKYFRIGRQPCMFSYMAKDVETTDVPVPNVLEIEKLFNGITSVSKPSVLHIDNA
HHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCC
NPSVIARHEKEGREIAKILVRHCTSGNVAAFGVESFDEKVISKNCLLTEPEDVLKAVNIL
CCCEEECCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NEIGGKRGENGMPYLLPGINLLSGLKGESNDTFEINYDYLKEIYDSGNILRRINIRQVVP
HHHCCCCCCCCCCEEECCHHHHHCCCCCCCCEEEECHHHHHHHHCCCCEEEEECHHHHHH
FFGTDITVKDVEKARKRKNLFLKFKEKIRTEIDNPMLKRMLPTETILKNVIVEVKEKNDL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCE
YFGRQFGSYPILIGVAEKNVEIGKFVDIRVTGYGRRSITGKIVK
EEECCCCCCCEEEEEECCCCEECEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]