Click here to switch to the map view.

The map label for this gene is aspB-like1 [H]

Identifier: 45357914

GI number: 45357914

Start: 346412

End: 347515

Strand: Direct

Name: aspB-like1 [H]

Synonym: MMP0351

Alternate gene names: 45357914

Gene position: 346412-347515 (Clockwise)

Preceding gene: 45357913

Following gene: 45357915

Centisome position: 20.85

GC content: 33.88

Gene sequence:

>1104_bases
ATGATACCTATTGCAAAACCCATACTAGGTAATGAAGAGATTTCTGCAGTAACTGATGTGTTAAAAAGCGGAATGATTGC
ACAGGGTAAAGAAGTTGAATTGTTTGAACGTGAATTTTGTGAGTATCACAACGTAAAATATGGTCTTGCAGTTTCTAATG
GGACAACGGCTTTAGACGTCGCATTAAAATCGTTAAAAGTTAGTTCTGGAGACGAAGTAATAACAACGCCCTTTACATTT
ATTGCTTCATCAAATTGTATTTTATATCAGGGTGCAAAGACTGTTTTTGCAGATATTGATGAAAAAACATTTAACATCGA
TCCAAATGAAGTTTTAGAAAACATTAATTCGAAAACGAAAGCAATAATTGCAGTTCACCTCTATGGTCAACCTGCAGATA
TGAAAGCACTTAGGGAAATTGCAGACGATCACAAGCTATTTTTAATCGAGGATGCTGCACAAGCTCACGGCGCAGAATTT
GAAGGCAAAAAAATTGGAAATTTTGGAGATATTACAACATTTAGTTTTTACCCTACAAAAAATATGACAAGTAGCGAGGG
AGGGATGGTTGTAACTAATAATCCAGAAATCGCAAAAATTTCAGATTTAATAAGAAATCATGGTCAGGCTGAAAAGTACT
TACATACAGCTTTAGGTTATAATTTTAGAATGACAAATATTTCAGCAGCAATAGGGAGAGTTCAGCTTAAAAAAGTTGAA
GAATGGACTGAAAAAAGAATTAAAAATGCAAAAGAATTATCTAAACGACTTTCTAAAATTGATGGTCTGTCTATTCCATA
TTTGGACAAACGTGTAAGGCACGTATTTCACCAGTATGTTTTAAGGGTTGAAGCTGATTTTTCATTATCTCGAGACGAAT
TTTCCAGGTATTTAAACGAAAATGGGGTAGGTACGGGTATTCATTATCCAATTCCGGTTCATAACCAGCCAGTTTATCAA
AACTTGGGATATGATAAAGATGAATGTCCAAATTCAATAGATGCTGCAAAAAAGGTTTTAAGCCTTCCAGTGCATCCTTC
TGTATCTTTAGATGATATTGAATATATTACACAAAAAATTGAAAATCGTGGAGGTGTTAATTAA

Upstream 100 bases:

>100_bases
ATGGTCGAAAAAACTGAGAAACTGGTTAAATATCGATGTAGTAATTGTAGTACTATAGTGGAAATTAAAAAAGAAGATCA
TGATTTATTGGGGGATTAAT

Downstream 100 bases:

>100_bases
TGTTAAAAGTGGCAGTTGTGGGTATTGGCGTTATGGGCTATAATCACGCTAGAATTTACAATGAATTACAAAAAGATGGA
AATGTGGAACTTGTAGGGCT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MIPIAKPILGNEEISAVTDVLKSGMIAQGKEVELFEREFCEYHNVKYGLAVSNGTTALDVALKSLKVSSGDEVITTPFTF
IASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSKTKAIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEF
EGKKIGNFGDITTFSFYPTKNMTSSEGGMVVTNNPEIAKISDLIRNHGQAEKYLHTALGYNFRMTNISAAIGRVQLKKVE
EWTEKRIKNAKELSKRLSKIDGLSIPYLDKRVRHVFHQYVLRVEADFSLSRDEFSRYLNENGVGTGIHYPIPVHNQPVYQ
NLGYDKDECPNSIDAAKKVLSLPVHPSVSLDDIEYITQKIENRGGVN

Sequences:

>Translated_367_residues
MIPIAKPILGNEEISAVTDVLKSGMIAQGKEVELFEREFCEYHNVKYGLAVSNGTTALDVALKSLKVSSGDEVITTPFTF
IASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSKTKAIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEF
EGKKIGNFGDITTFSFYPTKNMTSSEGGMVVTNNPEIAKISDLIRNHGQAEKYLHTALGYNFRMTNISAAIGRVQLKKVE
EWTEKRIKNAKELSKRLSKIDGLSIPYLDKRVRHVFHQYVLRVEADFSLSRDEFSRYLNENGVGTGIHYPIPVHNQPVYQ
NLGYDKDECPNSIDAAKKVLSLPVHPSVSLDDIEYITQKIENRGGVN
>Mature_367_residues
MIPIAKPILGNEEISAVTDVLKSGMIAQGKEVELFEREFCEYHNVKYGLAVSNGTTALDVALKSLKVSSGDEVITTPFTF
IASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSKTKAIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEF
EGKKIGNFGDITTFSFYPTKNMTSSEGGMVVTNNPEIAKISDLIRNHGQAEKYLHTALGYNFRMTNISAAIGRVQLKKVE
EWTEKRIKNAKELSKRLSKIDGLSIPYLDKRVRHVFHQYVLRVEADFSLSRDEFSRYLNENGVGTGIHYPIPVHNQPVYQ
NLGYDKDECPNSIDAAKKVLSLPVHPSVSLDDIEYITQKIENRGGVN

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=32.4538258575198, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI2367285, Length=367, Percent_Identity=27.5204359673025, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40900; Mature: 40900

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIAKPILGNEEISAVTDVLKSGMIAQGKEVELFEREFCEYHNVKYGLAVSNGTTALDV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHH
ALKSLKVSSGDEVITTPFTFIASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSKTK
HHHHHCCCCCCCEEECCCHHHCCCCEEEEECCCCEEEECCCCEECCCHHHHHHHCCCCCE
AIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEFEGKKIGNFGDITTFSFYPTK
EEEEEEEECCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCC
NMTSSEGGMVVTNNPEIAKISDLIRNHGQAEKYLHTALGYNFRMTNISAAIGRVQLKKVE
CCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
EWTEKRIKNAKELSKRLSKIDGLSIPYLDKRVRHVFHQYVLRVEADFSLSRDEFSRYLNE
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCC
NGVGTGIHYPIPVHNQPVYQNLGYDKDECPNSIDAAKKVLSLPVHPSVSLDDIEYITQKI
CCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ENRGGVN
HHCCCCC
>Mature Secondary Structure
MIPIAKPILGNEEISAVTDVLKSGMIAQGKEVELFEREFCEYHNVKYGLAVSNGTTALDV
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHH
ALKSLKVSSGDEVITTPFTFIASSNCILYQGAKTVFADIDEKTFNIDPNEVLENINSKTK
HHHHHCCCCCCCEEECCCHHHCCCCEEEEECCCCEEEECCCCEECCCHHHHHHHCCCCCE
AIIAVHLYGQPADMKALREIADDHKLFLIEDAAQAHGAEFEGKKIGNFGDITTFSFYPTK
EEEEEEEECCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCC
NMTSSEGGMVVTNNPEIAKISDLIRNHGQAEKYLHTALGYNFRMTNISAAIGRVQLKKVE
CCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHH
EWTEKRIKNAKELSKRLSKIDGLSIPYLDKRVRHVFHQYVLRVEADFSLSRDEFSRYLNE
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCC
NGVGTGIHYPIPVHNQPVYQNLGYDKDECPNSIDAAKKVLSLPVHPSVSLDDIEYITQKI
CCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ENRGGVN
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]