Definition Methanococcus maripaludis S2 chromosome, complete genome.
Accession NC_005791
Length 1,661,137

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The map label for this gene is yraQ [C]

Identifier: 45357765

GI number: 45357765

Start: 210169

End: 211125

Strand: Direct

Name: yraQ [C]

Synonym: MMP0202

Alternate gene names: 45357765

Gene position: 210169-211125 (Clockwise)

Preceding gene: 45357764

Following gene: 45357766

Centisome position: 12.65

GC content: 36.05

Gene sequence:

>957_bases
ATGTTTGGCTGGTTAGATTATGGTGCGAGATATATTGTAGAAAATATCCTGAATATGAGTATGGATACTGCAATTGGCTC
ATCCGTTCATTTTTTCATATACGACAGCTTAAAAATTGTTATACTGCTGTCTATTATGATATTTTCGATTTCATACATTA
GAAGTTATTTTCCACCTGAAAAAACAAAAAAAATACTTGAAAGGTACTCTGGAGTTTCTGGAAATATCATGGCATCTCTA
CTTGGGACTGTTACGCCATTTTGTTCATGCTCTTCAGTCCCAATATTTATTGGATTTATTGAAGCAGGAGTTCCATTAGG
AGTTACTCTTTCATTCTTGATTACTTCTCCGATAGTAAACGAAGCTGCGTTTGCAGTGCTTTTAGCATCATTTGGATGGC
AAATAGCAATGATTTATGTGGTTTCGGGCGTTATTATCGGGGTAGTTGGTGGACTTATAATTGGCAAACTTGGAATGGAA
AATCAGGTTGAAGAGTATGTATACAGCATAAGAAGCAGGGCTCGAAAAATAAAAGAATTAACGCAAAAAGAGCGGTTAAA
ATTTGCATACGACAGTACCCGAGATATTGTAAAGAGAGTCTGGCTCTATATCCTGATAGGTATAGGAATTGGTGCAATAA
TACATGGATATGCGCCAGAAGAAGTTCTTGCAAAATATGCAGGTCCTGAAAATCCATTGGCAGTAATTTTTGCAACAATT
ATTGCAGTGCCCCTTTATTCAAATGCTCTTGGAACAATTCCTATCGCAGAAGCTTTAATTGGAAAAGGGGTTGGAATTGG
AACTGCACTTGCATTTATGATGGCGACAACTGCGTTATCATTCCCAGAAGCAGTTTTACTTAGAAAAGTAATAAAACCAA
AATTAATCGCGGTATTCTTTGGAATTACGAGCATTGCAATTGTAATTACTGGATATTTATTCAATATCCTCCTTTAA

Upstream 100 bases:

>100_bases
CTCCTGTAAAAAGGTATTTTAAAATTCAAAAGCCCATGTTTTCCAATTTAAAAATAAGAATATGGGTAAATCACGTTTTA
TGTGATTTTTTGGTGAAAAA

Downstream 100 bases:

>100_bases
TTTAATTATTTTTAACTAAAACACACATTTAGAGGTAAAATCATGAAAATAACAATATTAGGAATGGGATGTAAAAAATG
CGTTGAAGTTTATGACAACG

Product: permease

Products: NA

Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Integral Membrane Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL
LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME
NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI
IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL

Sequences:

>Translated_318_residues
MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL
LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME
NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI
IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL
>Mature_318_residues
MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL
LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME
NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI
IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34589; Mature: 34589

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KTKKILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVN
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHH
EAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFF
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GITSIAIVITGYLFNILL
HHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KTKKILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVN
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHH
EAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFF
HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GITSIAIVITGYLFNILL
HHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA