| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is yraQ [C]
Identifier: 45357765
GI number: 45357765
Start: 210169
End: 211125
Strand: Direct
Name: yraQ [C]
Synonym: MMP0202
Alternate gene names: 45357765
Gene position: 210169-211125 (Clockwise)
Preceding gene: 45357764
Following gene: 45357766
Centisome position: 12.65
GC content: 36.05
Gene sequence:
>957_bases ATGTTTGGCTGGTTAGATTATGGTGCGAGATATATTGTAGAAAATATCCTGAATATGAGTATGGATACTGCAATTGGCTC ATCCGTTCATTTTTTCATATACGACAGCTTAAAAATTGTTATACTGCTGTCTATTATGATATTTTCGATTTCATACATTA GAAGTTATTTTCCACCTGAAAAAACAAAAAAAATACTTGAAAGGTACTCTGGAGTTTCTGGAAATATCATGGCATCTCTA CTTGGGACTGTTACGCCATTTTGTTCATGCTCTTCAGTCCCAATATTTATTGGATTTATTGAAGCAGGAGTTCCATTAGG AGTTACTCTTTCATTCTTGATTACTTCTCCGATAGTAAACGAAGCTGCGTTTGCAGTGCTTTTAGCATCATTTGGATGGC AAATAGCAATGATTTATGTGGTTTCGGGCGTTATTATCGGGGTAGTTGGTGGACTTATAATTGGCAAACTTGGAATGGAA AATCAGGTTGAAGAGTATGTATACAGCATAAGAAGCAGGGCTCGAAAAATAAAAGAATTAACGCAAAAAGAGCGGTTAAA ATTTGCATACGACAGTACCCGAGATATTGTAAAGAGAGTCTGGCTCTATATCCTGATAGGTATAGGAATTGGTGCAATAA TACATGGATATGCGCCAGAAGAAGTTCTTGCAAAATATGCAGGTCCTGAAAATCCATTGGCAGTAATTTTTGCAACAATT ATTGCAGTGCCCCTTTATTCAAATGCTCTTGGAACAATTCCTATCGCAGAAGCTTTAATTGGAAAAGGGGTTGGAATTGG AACTGCACTTGCATTTATGATGGCGACAACTGCGTTATCATTCCCAGAAGCAGTTTTACTTAGAAAAGTAATAAAACCAA AATTAATCGCGGTATTCTTTGGAATTACGAGCATTGCAATTGTAATTACTGGATATTTATTCAATATCCTCCTTTAA
Upstream 100 bases:
>100_bases CTCCTGTAAAAAGGTATTTTAAAATTCAAAAGCCCATGTTTTCCAATTTAAAAATAAGAATATGGGTAAATCACGTTTTA TGTGATTTTTTGGTGAAAAA
Downstream 100 bases:
>100_bases TTTAATTATTTTTAACTAAAACACACATTTAGAGGTAAAATCATGAAAATAACAATATTAGGAATGGGATGTAAAAAATG CGTTGAAGTTTATGACAACG
Product: permease
Products: NA
Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Integral Membrane Protein
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL
Sequences:
>Translated_318_residues MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL >Mature_318_residues MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPEKTKKILERYSGVSGNIMASL LGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGME NQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFFGITSIAIVITGYLFNILL
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34589; Mature: 34589
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPE CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCH KTKKILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVN HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHH EAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFF HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GITSIAIVITGYLFNILL HHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFGWLDYGARYIVENILNMSMDTAIGSSVHFFIYDSLKIVILLSIMIFSISYIRSYFPPE CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCH KTKKILERYSGVSGNIMASLLGTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVN HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCHHHHHHHHHHHHHHH EAAFAVLLASFGWQIAMIYVVSGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TQKERLKFAYDSTRDIVKRVWLYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH IAVPLYSNALGTIPIAEALIGKGVGIGTALAFMMATTALSFPEAVLLRKVIKPKLIAVFF HHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GITSIAIVITGYLFNILL HHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA