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The map label for this gene is yvrC [H]

Identifier: 45357759

GI number: 45357759

Start: 204032

End: 205093

Strand: Direct

Name: yvrC [H]

Synonym: MMP0196

Alternate gene names: 45357759

Gene position: 204032-205093 (Clockwise)

Preceding gene: 45357758

Following gene: 45357760

Centisome position: 12.28

GC content: 36.44

Gene sequence:

>1062_bases
ATGAGGACATATTTGGTGTTATTTTCAATACTTCTGGTTTTTTTGGCCGGATGCATATCCACAGAATCTAAAGTTGAGGA
TACAACAACAGCGGTTACCTTTGTTTCGGTTACCGATTTTACGGGTGAAACTTCTACAATTAATTCACCGGTTGAGAGAG
TAGTTTCTAATTATGGCCTGATACCGCCGATAATTTACCTTTTTGGTGAAGGGGATAAAATTGTTGCAGGAAGAGGCGTT
ATGGGGGCTGATGAATTTATTGATGCAGTTGACCCAGAATTCAAAACCCGGTCAAAAGATATTAAAAGCGACAACGTTGA
AGAAATTAAAAGTTTAAATCCGGATGTTATTTTTGCGCCATCTTGGGGTTCACAACAGGGACAGTACCCACAATTAAAGA
GTTTGGGAATTCCTGTTGTTTTTATCGACATAGAAACAGCTTCTAATTATTATAAAACTATTGAAATGATGGGCGAAGTA
TTTCAAAAAGAAGCTTATGCACAGGAATTAATCGATTATTACAATCAATCTACAAACGATGTTTTAAAAAGAACAGCATC
AATCAGTGAAAATGAAAAACCAAGGGTTTTATTTTTAGTTTACGACCAGAGAAAGAATTCATACTGGACTCCTGGTGGAG
AATTCTATCAAAATAATTTAATTACAATGGCAGGTGGAAAAACTGTTTCCAGCGATTTACCAACCGGAAAAGCACAAATT
AACGTGGAACAAGCTGCAAGCTGGAATCCAGATGTTATAATCACAAGTGCTCACACGATGGAGTATCCAAGCACGAAAGT
AAAAGAAGATGTATTAACTGATGAGGGTTGGAAAGAAATTAATGCAGTTAAATCTGGAAATGTGTACGCAATGCCGTTTG
ATGGTGAATCCTGGGATACACTTGGTTCAAAATATGTTCTCGGGCTATACTGGACTGCAAAAACACTTCACCCTGATATG
TATACTGATGTTGATATCTTAAATCTTACATCATCAGAATATGAACGGTTTTTCAATGTAAGTATTGACGAAGTTACGCT
CGTTGGTGATAATATTGAATAA

Upstream 100 bases:

>100_bases
AGTCCACCTTAAAATTTCAAAAGTTAATTAAAATTAGTTATAAAAATATTTAAATAGTAATTTTATGTAATTAACATGTC
AAAGAATAAAAGGTGTACTC

Downstream 100 bases:

>100_bases
AAATTATGTTTTTCCTTTTTTGTTTGCAGGCGTGTTTTTATTTTCCCTGTTTGTTGGAAGATACATGTTTGATCCTTCTT
TAATTTTTACAAATTCACTT

Product: ABC-type iron(III) transport system periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MRTYLVLFSILLVFLAGCISTESKVEDTTTAVTFVSVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGV
MGADEFIDAVDPEFKTRSKDIKSDNVEEIKSLNPDVIFAPSWGSQQGQYPQLKSLGIPVVFIDIETASNYYKTIEMMGEV
FQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQI
NVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYWTAKTLHPDM
YTDVDILNLTSSEYERFFNVSIDEVTLVGDNIE

Sequences:

>Translated_353_residues
MRTYLVLFSILLVFLAGCISTESKVEDTTTAVTFVSVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGV
MGADEFIDAVDPEFKTRSKDIKSDNVEEIKSLNPDVIFAPSWGSQQGQYPQLKSLGIPVVFIDIETASNYYKTIEMMGEV
FQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQI
NVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYWTAKTLHPDM
YTDVDILNLTSSEYERFFNVSIDEVTLVGDNIE
>Mature_353_residues
MRTYLVLFSILLVFLAGCISTESKVEDTTTAVTFVSVTDFTGETSTINSPVERVVSNYGLIPPIIYLFGEGDKIVAGRGV
MGADEFIDAVDPEFKTRSKDIKSDNVEEIKSLNPDVIFAPSWGSQQGQYPQLKSLGIPVVFIDIETASNYYKTIEMMGEV
FQKEAYAQELIDYYNQSTNDVLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQI
NVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDTLGSKYVLGLYWTAKTLHPDM
YTDVDILNLTSSEYERFFNVSIDEVTLVGDNIE

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39455; Mature: 39455

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYLVLFSILLVFLAGCISTESKVEDTTTAVTFVSVTDFTGETSTINSPVERVVSNYGL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCC
IPPIIYLFGEGDKIVAGRGVMGADEFIDAVDPEFKTRSKDIKSDNVEEIKSLNPDVIFAP
CCCEEEEECCCCEEEECCCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCCEEEEC
SWGSQQGQYPQLKSLGIPVVFIDIETASNYYKTIEMMGEVFQKEAYAQELIDYYNQSTND
CCCCCCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQI
HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCEECCCCCCCCEEE
NVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDT
EHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCHHH
LGSKYVLGLYWTAKTLHPDMYTDVDILNLTSSEYERFFNVSIDEVTLVGDNIE
CCCEEEEEEEEEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure
MRTYLVLFSILLVFLAGCISTESKVEDTTTAVTFVSVTDFTGETSTINSPVERVVSNYGL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCC
IPPIIYLFGEGDKIVAGRGVMGADEFIDAVDPEFKTRSKDIKSDNVEEIKSLNPDVIFAP
CCCEEEEECCCCEEEECCCCCCHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCCEEEEC
SWGSQQGQYPQLKSLGIPVVFIDIETASNYYKTIEMMGEVFQKEAYAQELIDYYNQSTND
CCCCCCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VLKRTASISENEKPRVLFLVYDQRKNSYWTPGGEFYQNNLITMAGGKTVSSDLPTGKAQI
HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCEECCCCCCCCEEE
NVEQAASWNPDVIITSAHTMEYPSTKVKEDVLTDEGWKEINAVKSGNVYAMPFDGESWDT
EHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCHHH
LGSKYVLGLYWTAKTLHPDMYTDVDILNLTSSEYERFFNVSIDEVTLVGDNIE
CCCEEEEEEEEEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]