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The map label for this gene is ygfT [C]

Identifier: 45357667

GI number: 45357667

Start: 113747

End: 114364

Strand: Direct

Name: ygfT [C]

Synonym: MMP0104

Alternate gene names: 45357667

Gene position: 113747-114364 (Clockwise)

Preceding gene: 45357666

Following gene: 45357668

Centisome position: 6.85

GC content: 30.26

Gene sequence:

>618_bases
ATGTCTCACGAAGGCGAAGAGTTTAACAAAATTTTTTCAAAAGGAAAATTTTTAAAAAATATTTTTTTCAACCTGTTCAG
ATCATACAAAAATCCTGAAGTTATTGGAGAAACCACAAATCCAGAACTTGATGACTGCATATGTTGCGGTTTATGCGTTG
ATGTATGTCCAACAAATGCGATATCTGTTTTTAAATTTCGAGATATAATCTGTGAACACTGCGGTGCGTGTTTGAATGTA
TGCCCTGTTGACGCAATTGAAAAAAATCGATTTTCAGTGGATCCTGAAAAATGTATAAAATGCGGAGTATGTTCTATATT
TTGTACAATTCCGATTTTAAAAAATGAAATTCCTGTTTTAAACGTTCCTGAAGTTACAACGGAATGCAATAATTGTAAAT
TGTGTATTCAAAAATGCCCTCAAAAAGCAATTTCTTTTGAAGATGGCAAAATTTCAATAAATTCAAAATGTAATTTGTGT
CTTAAGTGTGTTGAATTCTGTCCTCTTAATGCATTAAAATCTCCAAAAGAGTCATTAAAGTCTAAAATTATTAAAGTAGA
TCTAAATTCCTGTATTTTTTGTAAAGACTGCGAAGAAATATGTCCAGTTAAAAAATGA

Upstream 100 bases:

>100_bases
TACAGGACTGTCACTCCTGTGACTCGGGTTCAAATCCCGGCCAGAGCGCTTTTTTAATAATAATTATTATAATCGATATA
TTTGGATTTATTGTGAAAAC

Downstream 100 bases:

>100_bases
TTACGAAATCAGACGATTTTAATCCACTATTAACATTTATATATTACTTTCTCAGATATGAATAATATTCATTCGGGGGA
GGAATTTTTTTGAAATACGG

Product: polyferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSHEGEEFNKIFSKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDVCPTNAISVFKFRDIICEHCGACLNV
CPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLC
LKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPVKK

Sequences:

>Translated_205_residues
MSHEGEEFNKIFSKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDVCPTNAISVFKFRDIICEHCGACLNV
CPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLC
LKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPVKK
>Mature_204_residues
SHEGEEFNKIFSKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDVCPTNAISVFKFRDIICEHCGACLNVC
PVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCL
KCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014406 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 22943; Mature: 22812

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
12.7 %Cys+Met (Translated Protein)
12.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
12.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEGEEFNKIFSKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDVCPTNA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCH
ISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVL
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
NVPEVTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNALKSPKESLK
CCCHHHCCCCCHHHHHHHCCHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHH
SKIIKVDLNSCIFCKDCEEICPVKK
HHEEEEECCCEEEECCHHHHCCCCC
>Mature Secondary Structure 
SHEGEEFNKIFSKGKFLKNIFFNLFRSYKNPEVIGETTNPELDDCICCGLCVDVCPTNA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCH
ISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVL
HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
NVPEVTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNALKSPKESLK
CCCHHHCCCCCHHHHHHHCCHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHH
SKIIKVDLNSCIFCKDCEEICPVKK
HHEEEEECCCEEEECCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]