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The map label for this gene is 42523543

Identifier: 42523543

GI number: 42523543

Start: 1976934

End: 1977488

Strand: Direct

Name: 42523543

Synonym: Bd2071

Alternate gene names: NA

Gene position: 1976934-1977488 (Clockwise)

Preceding gene: 42523540

Following gene: 42523544

Centisome position: 52.26

GC content: 48.65

Gene sequence:

>555_bases
ATGGACACTAGAACTCGCGCCCTGGACCTGGGACGCCATTATCTGCAAACCCTGGGCTTTAATGGCTTCAGCTTTCAAAC
AGTCGCCGATGCCCTGGGGATCCGCAAAGCCAGTCTGCATTACTATTTCGCCTCAAAAGAAGACCTGGGCATGGCCCTGA
TTGAGGAATACCAAAAGTCTTATGCCGACTGGGCCGTAAAAAGAGAGCATCTCTCTGCAGAAGAAAAAATGGAACAACTG
ATCCAGATGTTTGTCAAAATCGGGGCCGATCACAAAATCTGTCCCGGAGGCGTTTTGTGCGCGGACTTTGGCAGCGTTTC
AAATCCGATGAAGAAAAAACTGCTGCAGTTTCATCTGGGACAAAAAGCCTGGCTGGTTCGCACTCTCAAACAAGGCATTC
AGGAAAAAACTTTCCGAAAAAATCTGCCTGTGGAAGAAACCGCTGATCTGATTCAAGCCAGCATTCAAGGAGGCCTGCAG
GTGGCGCGCATTCGCGGTGAAATGAAAAGCTTCAAGACTTTGGGAAAGACACTGATTCAGAACCTTAAAGCTTGA

Upstream 100 bases:

>100_bases
ATTCTGGTTACCTGCAGTTATTCTGCTTGATACCTACCTACTGATAGGTAGATAATATCCCTGTTGGAGCCCGAATGCAA
GGGCTGAAAAGGAATAGAGT

Downstream 100 bases:

>100_bases
GCAAACTCAGCAGTCCGTAGGACTCTCTCTCTACGCCCTGCACCGCAAATCACCTATCATTTCCTCTTAGTAATTCCATA
ATTTACAAAACTTTTGTTAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; HTH-Type Protein SlmA; TetR Family Regulatory Protein; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLGMALIEEYQKSYADWAVKREHLSAEEKMEQL
IQMFVKIGADHKICPGGVLCADFGSVSNPMKKKLLQFHLGQKAWLVRTLKQGIQEKTFRKNLPVEETADLIQASIQGGLQ
VARIRGEMKSFKTLGKTLIQNLKA

Sequences:

>Translated_184_residues
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLGMALIEEYQKSYADWAVKREHLSAEEKMEQL
IQMFVKIGADHKICPGGVLCADFGSVSNPMKKKLLQFHLGQKAWLVRTLKQGIQEKTFRKNLPVEETADLIQASIQGGLQ
VARIRGEMKSFKTLGKTLIQNLKA
>Mature_184_residues
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLGMALIEEYQKSYADWAVKREHLSAEEKMEQL
IQMFVKIGADHKICPGGVLCADFGSVSNPMKKKLLQFHLGQKAWLVRTLKQGIQEKTFRKNLPVEETADLIQASIQGGLQ
VARIRGEMKSFKTLGKTLIQNLKA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20778; Mature: 20778

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLGMALIEEYQKS
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
YADWAVKREHLSAEEKMEQLIQMFVKIGADHKICPGGVLCADFGSVSNPMKKKLLQFHLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCC
QKAWLVRTLKQGIQEKTFRKNLPVEETADLIQASIQGGLQVARIRGEMKSFKTLGKTLIQ
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NLKA
HHCC
>Mature Secondary Structure
MDTRTRALDLGRHYLQTLGFNGFSFQTVADALGIRKASLHYYFASKEDLGMALIEEYQKS
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
YADWAVKREHLSAEEKMEQLIQMFVKIGADHKICPGGVLCADFGSVSNPMKKKLLQFHLG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCC
QKAWLVRTLKQGIQEKTFRKNLPVEETADLIQASIQGGLQVARIRGEMKSFKTLGKTLIQ
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NLKA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA