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The map label for this gene is yfgC [H]

Identifier: 42523540

GI number: 42523540

Start: 1974166

End: 1975002

Strand: Direct

Name: yfgC [H]

Synonym: Bd2068

Alternate gene names: 42523540

Gene position: 1974166-1975002 (Clockwise)

Preceding gene: 42523537

Following gene: 42523543

Centisome position: 52.19

GC content: 53.52

Gene sequence:

>837_bases
TTGATTTTTGCAAGTTTCCTGCGCTATCTTAGTTTCATGAAAACATTGAGACTTATCGCCCTGCTAATGACTTCCATGCT
TATCAGTTGCTCCACTCTGGCACCGAAAGTGAACGAGTCGGATATCAACGCCGAAGCCGCGAAGGCCTATGCTGAAATCA
AAGCCAAATCCAAAATCTCCACCAACAAAGAATGGACCGCGATGGTTCAGCGTGTGGCCGATCGTATCGCCAAGGCCTCT
GGTGAAAACTTCCAGTGGGAAGTCGTTTTGATCGACAGCCCCGAGGTCAACGCTTGGTGCATGCCTGGCGGAAAGATGGC
TGTTTATACCGGCATCATGCCCGTGCTGAAAACCGAAGGGGCACTGGCGGCGGTGATGGGTCATGAAGTGGCTCACGCAA
CTTTGCGCCACGGGATGGAAGGTTATATTCGCGCAAAACAACAAAGTTATGCGGGGATCCTGATTGCGGGCGCCACCGTC
GTGGGTGGACAGTTGCTGTGTAAAACCGAAGAGTGCCGTAAATGGAGCGCCCTGGGCGGAGTCGCGGCAGGTTTTGCCCT
GACATTCCTGGAAAGAAAGTTCAGCCGCGGGGATGAAACATCTGCAGATAAAAAAGGTCAGATCTATATGGCCAAGGCCG
GGTACGACCCGAAAGAATCTTTAGTGCTGTGGGATCGCATGAACGCCGCCAAACAAGGCGCGGCCCCACCGGAGTTTATT
TCCACGCACCCGTCTGATCAGACCCGTAAGAACAATCTGAAAAGCTGGCTGCCGGAAGCCGAAGCTGCTTACGCCCAGTC
GCCAAGCAAATACGGCCTGGGCGCAGCGATCAAGTAA

Upstream 100 bases:

>100_bases
CAAGTCCAGTTATTCGCACCAATTTTCCCTTTCTGTTTTCAAGCAAATCCAAGTCAGATCACAAAGCGTTTCAACAAACA
AAAGCCTTTGCGGCGGCAGA

Downstream 100 bases:

>100_bases
TCCTACCTACAGGACGCGGTGAAGATCACATCCTTTGCCGCGAACTGAACATCATAACGATCTTCAGACTTGTTATGTTT
CATCACCAGACGACCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIFASFLRYLSFMKTLRLIALLMTSMLISCSTLAPKVNESDINAEAAKAYAEIKAKSKISTNKEWTAMVQRVADRIAKAS
GENFQWEVVLIDSPEVNAWCMPGGKMAVYTGIMPVLKTEGALAAVMGHEVAHATLRHGMEGYIRAKQQSYAGILIAGATV
VGGQLLCKTEECRKWSALGGVAAGFALTFLERKFSRGDETSADKKGQIYMAKAGYDPKESLVLWDRMNAAKQGAAPPEFI
STHPSDQTRKNNLKSWLPEAEAAYAQSPSKYGLGAAIK

Sequences:

>Translated_278_residues
MIFASFLRYLSFMKTLRLIALLMTSMLISCSTLAPKVNESDINAEAAKAYAEIKAKSKISTNKEWTAMVQRVADRIAKAS
GENFQWEVVLIDSPEVNAWCMPGGKMAVYTGIMPVLKTEGALAAVMGHEVAHATLRHGMEGYIRAKQQSYAGILIAGATV
VGGQLLCKTEECRKWSALGGVAAGFALTFLERKFSRGDETSADKKGQIYMAKAGYDPKESLVLWDRMNAAKQGAAPPEFI
STHPSDQTRKNNLKSWLPEAEAAYAQSPSKYGLGAAIK
>Mature_278_residues
MIFASFLRYLSFMKTLRLIALLMTSMLISCSTLAPKVNESDINAEAAKAYAEIKAKSKISTNKEWTAMVQRVADRIAKAS
GENFQWEVVLIDSPEVNAWCMPGGKMAVYTGIMPVLKTEGALAAVMGHEVAHATLRHGMEGYIRAKQQSYAGILIAGATV
VGGQLLCKTEECRKWSALGGVAAGFALTFLERKFSRGDETSADKKGQIYMAKAGYDPKESLVLWDRMNAAKQGAAPPEFI
STHPSDQTRKNNLKSWLPEAEAAYAQSPSKYGLGAAIK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=184, Percent_Identity=29.8913043478261, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1788840, Length=195, Percent_Identity=26.1538461538462, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322940, Length=193, Percent_Identity=33.160621761658, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 30222; Mature: 30222

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFASFLRYLSFMKTLRLIALLMTSMLISCSTLAPKVNESDINAEAAKAYAEIKAKSKIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TNKEWTAMVQRVADRIAKASGENFQWEVVLIDSPEVNAWCMPGGKMAVYTGIMPVLKTEG
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEEHHHHHHHHHHCCC
ALAAVMGHEVAHATLRHGMEGYIRAKQQSYAGILIAGATVVGGQLLCKTEECRKWSALGG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCHHHCCEEEECCHHHHHHHHHHH
VAAGFALTFLERKFSRGDETSADKKGQIYMAKAGYDPKESLVLWDRMNAAKQGAAPPEFI
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHCEEEHHHHHHHHCCCCCHHHH
STHPSDQTRKNNLKSWLPEAEAAYAQSPSKYGLGAAIK
CCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIFASFLRYLSFMKTLRLIALLMTSMLISCSTLAPKVNESDINAEAAKAYAEIKAKSKIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
TNKEWTAMVQRVADRIAKASGENFQWEVVLIDSPEVNAWCMPGGKMAVYTGIMPVLKTEG
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEECCCCCEEHHHHHHHHHHCCC
ALAAVMGHEVAHATLRHGMEGYIRAKQQSYAGILIAGATVVGGQLLCKTEECRKWSALGG
HHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCHHHCCEEEECCHHHHHHHHHHH
VAAGFALTFLERKFSRGDETSADKKGQIYMAKAGYDPKESLVLWDRMNAAKQGAAPPEFI
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHCEEEHHHHHHHHCCCCCHHHH
STHPSDQTRKNNLKSWLPEAEAAYAQSPSKYGLGAAIK
CCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]