Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523533

Identifier: 42523533

GI number: 42523533

Start: 1967346

End: 1968314

Strand: Direct

Name: 42523533

Synonym: Bd2060

Alternate gene names: NA

Gene position: 1967346-1968314 (Clockwise)

Preceding gene: 42523529

Following gene: 42523536

Centisome position: 52.01

GC content: 51.39

Gene sequence:

>969_bases
ATGACAAAAACAGCAAAACAAATCCTCATTTTATTGGTGTCCCTTTTATCAACCCACAGCTTTGCCGCCCCGACCGGGAA
AATCTCGGACTCCCTGGTGGAAAATCTGGCCTGTGACCGGATTTCGACCGATGAAATCTATCGACGCATCCGCCCCGAGT
CTTTAGGCAGCAGCTATCACACTCTGTCAGTGAACTGGCCGTTTTCAGCCGGGCTGTATGATCTGGCGGCGTGCTGGTCC
TTGTCGCGCACGCAGCGTCTGTTCTTTTATCTGTCGCGCTGGAATCAGCACAGCGATCCAACGCCTCAGCAGACAACTGA
AATCCTGGATATGGTGCGCGGCAGTCGTCCGTACGCTTCAGGCAGCGGACTGAAAGAAACGGCATTGAGTGAATTTAAAG
TTTTCAGCCAAAAAGATTCCCAGTGGCGCACTAATACGCCGTTGTGGTCGCAGATGCAGTACGGGTTTTCCCAGAATTTT
TCAAACGGCAAAACAATGTACCGCGCCTGGAAGCATGAAATTGAACACTATCAAAAAGAGCGCTTTCATGAGTTTGCAAA
AAACCTGAAATTCGTGATTGGTGATGACGCCCGCAGTGGTCGCAAGAACCGCCAGACCCGTGATGTGCTTTTAAGAAACC
TTGAATCCCACCGTCTGACTTTGCTTTTGTTACGCCCCACCCGCACCGCCCAGCACATTGTGGTGGCCAAGTCCTTTGAA
ATTAAAAGCAACGGCCGGATCGAAATCCGCGTCTATGATTCCAATCAGCCTCTCCGGGATCAGATCGTGGTTTTTGATGG
ACGCGAGAACGACTTCTATGCACCCGACATCGTGCGAGGGCTGCCTCGGGTGAAGAACGCGAACGACGCTATCGGTGTCT
TTATCGTGGATGAATACGAACGAAGCCTGGTCGACACGGCCTTACTGAAACACTACAAAAAAGCTTGCTCAGCCCCGACC
GGAACGTAA

Upstream 100 bases:

>100_bases
TGGCCTTTTTAGCTGTTCTTCCCCCATGAAACCTCCTCAAGTATGTTAAACGATAGCAACTTGACGGGGCATCAATTCTT
GCGGTCTCTGGACCTTAGTT

Downstream 100 bases:

>100_bases
GCTGAAGCAGAAATAAAAAAGCCACCCTTATCAGGTGGCTTTTTCTTTGAAACGTACCGAAATATTTGAAATTTAGTTGC
CGGACATTTTGCAGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTKTAKQILILLVSLLSTHSFAAPTGKISDSLVENLACDRISTDEIYRRIRPESLGSSYHTLSVNWPFSAGLYDLAACWS
LSRTQRLFFYLSRWNQHSDPTPQQTTEILDMVRGSRPYASGSGLKETALSEFKVFSQKDSQWRTNTPLWSQMQYGFSQNF
SNGKTMYRAWKHEIEHYQKERFHEFAKNLKFVIGDDARSGRKNRQTRDVLLRNLESHRLTLLLLRPTRTAQHIVVAKSFE
IKSNGRIEIRVYDSNQPLRDQIVVFDGRENDFYAPDIVRGLPRVKNANDAIGVFIVDEYERSLVDTALLKHYKKACSAPT
GT

Sequences:

>Translated_322_residues
MTKTAKQILILLVSLLSTHSFAAPTGKISDSLVENLACDRISTDEIYRRIRPESLGSSYHTLSVNWPFSAGLYDLAACWS
LSRTQRLFFYLSRWNQHSDPTPQQTTEILDMVRGSRPYASGSGLKETALSEFKVFSQKDSQWRTNTPLWSQMQYGFSQNF
SNGKTMYRAWKHEIEHYQKERFHEFAKNLKFVIGDDARSGRKNRQTRDVLLRNLESHRLTLLLLRPTRTAQHIVVAKSFE
IKSNGRIEIRVYDSNQPLRDQIVVFDGRENDFYAPDIVRGLPRVKNANDAIGVFIVDEYERSLVDTALLKHYKKACSAPT
GT
>Mature_321_residues
TKTAKQILILLVSLLSTHSFAAPTGKISDSLVENLACDRISTDEIYRRIRPESLGSSYHTLSVNWPFSAGLYDLAACWSL
SRTQRLFFYLSRWNQHSDPTPQQTTEILDMVRGSRPYASGSGLKETALSEFKVFSQKDSQWRTNTPLWSQMQYGFSQNFS
NGKTMYRAWKHEIEHYQKERFHEFAKNLKFVIGDDARSGRKNRQTRDVLLRNLESHRLTLLLLRPTRTAQHIVVAKSFEI
KSNGRIEIRVYDSNQPLRDQIVVFDGRENDFYAPDIVRGLPRVKNANDAIGVFIVDEYERSLVDTALLKHYKKACSAPTG
T

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37046; Mature: 36915

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTAKQILILLVSLLSTHSFAAPTGKISDSLVENLACDRISTDEIYRRIRPESLGSSYH
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCEE
TLSVNWPFSAGLYDLAACWSLSRTQRLFFYLSRWNQHSDPTPQQTTEILDMVRGSRPYAS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
GSGLKETALSEFKVFSQKDSQWRTNTPLWSQMQYGFSQNFSNGKTMYRAWKHEIEHYQKE
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RFHEFAKNLKFVIGDDARSGRKNRQTRDVLLRNLESHRLTLLLLRPTRTAQHIVVAKSFE
HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEE
IKSNGRIEIRVYDSNQPLRDQIVVFDGRENDFYAPDIVRGLPRVKNANDAIGVFIVDEYE
ECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEEECHHH
RSLVDTALLKHYKKACSAPTGT
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TKTAKQILILLVSLLSTHSFAAPTGKISDSLVENLACDRISTDEIYRRIRPESLGSSYH
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCEE
TLSVNWPFSAGLYDLAACWSLSRTQRLFFYLSRWNQHSDPTPQQTTEILDMVRGSRPYAS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
GSGLKETALSEFKVFSQKDSQWRTNTPLWSQMQYGFSQNFSNGKTMYRAWKHEIEHYQKE
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RFHEFAKNLKFVIGDDARSGRKNRQTRDVLLRNLESHRLTLLLLRPTRTAQHIVVAKSFE
HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEE
IKSNGRIEIRVYDSNQPLRDQIVVFDGRENDFYAPDIVRGLPRVKNANDAIGVFIVDEYE
ECCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEEECHHH
RSLVDTALLKHYKKACSAPTGT
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA