| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523506
Identifier: 42523506
GI number: 42523506
Start: 1940544
End: 1940924
Strand: Direct
Name: 42523506
Synonym: Bd2032
Alternate gene names: NA
Gene position: 1940544-1940924 (Clockwise)
Preceding gene: 42523505
Following gene: 42523510
Centisome position: 51.3
GC content: 48.82
Gene sequence:
>381_bases ATGAAAAAGCTTTTGTTGGTTTTGTCAGTTATGGGATCTTTGGCAGCGTGCAGTCACGGGAACTGCCGCGCCCAGAAGGA AGCTCAGAAAAACGCCCCTAAAAGCGAGGTTGTTGTGGAAAAATCCAAAGCCACGGATCGTGTGAAGGTGTTTAAGTACG ACGGATCTTTGCAGTGCGGTCAGGGTAAAAAAATCGCCCCGGCTGAAATGCAAAAAGACCTCAAGGGTATTGAGGTCTTT TCTTCATCCAATCAGAATGACGGGATGATGCGTATTCAACTTTGCGGAAGCCCGACAGGCAACGCCAATGTCTACGAGAT CGATCGTAAGGACCTGGACGCTGCCCTGAAGCTGGGCTTTAAAGAGTGGTTGGCTGAATAA
Upstream 100 bases:
>100_bases GGATGAAAAGGCGGGCCGAGTTTACTTTATTTCCGGCGAAGCGAATTTGTATGCGATCGACGCCGGATGGATCAGAACCC CTTACTTTTAGGAGTAAGTC
Downstream 100 bases:
>100_bases GCAAACGCTCTTTGATTCTTTCTGTCGGGAGAGGACCTTCTCCCGGCACGTAGCGACCATCGATCACCATCACTTCATTT GGTTTCTCAACGTTTCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE
Sequences:
>Translated_126_residues MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE >Mature_126_residues MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13764; Mature: 13764
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCG CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCEECC QGKKIAPAEMQKDLKGIEVFSSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGF CCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCH KEWLAE HHHHCC >Mature Secondary Structure MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCG CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCEECC QGKKIAPAEMQKDLKGIEVFSSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGF CCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCH KEWLAE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA