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The map label for this gene is slc39

Identifier: 42523494

GI number: 42523494

Start: 1929044

End: 1930366

Strand: Direct

Name: slc39

Synonym: Bd2019

Alternate gene names: NA

Gene position: 1929044-1930366 (Clockwise)

Preceding gene: 42523492

Following gene: 42523499

Centisome position: 50.99

GC content: 51.1

Gene sequence:

>1323_bases
ATGAAAGTCCAGAGCTTGTTGCGAATTGAAACCCAACTGTTGTTGGGAAGATTGTTAACCAGATCCGGGGATCAGGCCTG
GGACTTTGTGGTGCCATTTGCTTTGTTGGTGATCTTTCCTGGGAAGCTGCAGGTCGCGGCGTTTTACTATCTTATAGTGA
AGATCGGGACCTTTCTTTTGACCCCTTCCAGCGGGAAATGGATCGACACTCATCCGCGCATTCAGGTGGTGAAGTGGGGA
GTCTGGCTGCAGTTCTTTGCCATTCTTGCCGGCATGGTGTTTTTTGGAATGCTGGATGGTCTTGTTCGTGCGGGCGGCCG
TGAGTCGTGGCTGTTGTCTGTCCTTTTTATCGCTCTGGCTTTGTCGGGGGTGATGGCTTCATTGGGGTCGCAGATCACAG
ACATCTCAGTTGGGAATGATCTGGCGCCATCCCTGGTGGCCCCGGAAAAACTGACCCACTTCAACAGCTGGTTGCGCCGA
ATCGATCTGGCCACCGAGGTGGGGGCGCCCATCCTGGCCGGAGCTTTATTTGCATTTCACCCAGAACAACTTCCGCTGGC
TGGTTTGTTCCTGATTGGTCTTTGGAATCTGGTTTCTTTTGTTCCTGAATACTTTCTTTTGCGGAATGTGATTCAAAGGT
CGGGCTTGAAGATCAAGGTTCTGACGGAGGCGCAAAGCTGGAAAGACACTTTTCACATCAATCTGCGCGGCTCTTTCAGC
GATCCTATTTTCTGGCTGATCTTAAGTTATGCGTTGTTGTGGCTTTCGGTGTTAAGTCCTCATGGGGTTTTGCTGGCAGC
CTACCTGAAGGATGAGATGAGACTTCCCGAAACAGAGATTGGCCTTTTCCGTGGGTTGGGTGCCGTCTTTGGTTTGATCT
CCACTGTGAGTTTTCCCTATCTGGTCCGTCGCCTGGGATTGATCAGCAGTTCAAGATGGCATCTGGGATTTCAGGGAGTG
ACACTGGGAATTGCAGTCACCGCTTTTGCGATGGGATCGACGGCCTCGGTCTATGTGTTTTTGGGATGTATTCTGCTTTC
GCGGGTGGGTCTTTATGGGTTTTCCAACGGGGAGTTTGAACTTCGCCAAAGACTTATCCCTGAAGGGCGTCGCGGGGAAT
TGAACTCGCTAAGTTCTTTGACCACAACGTCTGCCACCTTGATTTTATTTTCGGCCGGCAGTTTGCTGCCACAAACGGAA
GACTTTAAGTATCTGGTTTATGTCTCACTTGCCGCCGTGCTTTTGGCAAATGTGGTTTTTATCAAATGGTCCAGCAGGCA
GGGCGTGGTGACATCAGGCGCTGCTGAACCCGTTGAATCCTGA

Upstream 100 bases:

>100_bases
CCTTTGGCGCGTTTCAGGCGTTTTGAGACATCCTCGTGACTTGCGTGTTGCTTTTTGTGTGACATGAATCTAGCATCCCC
TCCCGGGGGATAGGATGTCA

Downstream 100 bases:

>100_bases
AGTTTATTTTACGTAAAGGTCTGCGGCTTTTGGAGTGGACTTGATCAGTTTTAGTTTTTTCATCTGCTGAACCAGGGTGT
CCCAGCGGTCATCGGTCATG

Product: solute carrier family 39 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKVQSLLRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQVVKWG
VWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRR
IDLATEVGAPILAGALFAFHPEQLPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEAQSWKDTFHINLRGSFS
DPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLGLISSSRWHLGFQGV
TLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTE
DFKYLVYVSLAAVLLANVVFIKWSSRQGVVTSGAAEPVES

Sequences:

>Translated_440_residues
MKVQSLLRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQVVKWG
VWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRR
IDLATEVGAPILAGALFAFHPEQLPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEAQSWKDTFHINLRGSFS
DPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLGLISSSRWHLGFQGV
TLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTE
DFKYLVYVSLAAVLLANVVFIKWSSRQGVVTSGAAEPVES
>Mature_440_residues
MKVQSLLRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPRIQVVKWG
VWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRR
IDLATEVGAPILAGALFAFHPEQLPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEAQSWKDTFHINLRGSFS
DPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPYLVRRLGLISSSRWHLGFQGV
TLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFELRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTE
DFKYLVYVSLAAVLLANVVFIKWSSRQGVVTSGAAEPVES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7657100, Length=354, Percent_Identity=26.271186440678, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48364; Mature: 48364

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVQSLLRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEE
TPSSGKWIDTHPRIQVVKWGVWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALA
CCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRRIDLATEVGAPILAGALFAFH
HHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PEQLPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEAQSWKDTFHINLRGSFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCC
DPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRRLGLISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFE
HHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLANVVF
HHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEE
IKWSSRQGVVTSGAAEPVES
EEECCCCCCEECCCCCCCCC
>Mature Secondary Structure
MKVQSLLRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEE
TPSSGKWIDTHPRIQVVKWGVWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALA
CCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LSGVMASLGSQITDISVGNDLAPSLVAPEKLTHFNSWLRRIDLATEVGAPILAGALFAFH
HHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PEQLPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVLTEAQSWKDTFHINLRGSFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCC
DPIFWLILSYALLWLSVLSPHGVLLAAYLKDEMRLPETEIGLFRGLGAVFGLISTVSFPY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRRLGLISSSRWHLGFQGVTLGIAVTAFAMGSTASVYVFLGCILLSRVGLYGFSNGEFE
HHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
LRQRLIPEGRRGELNSLSSLTTTSATLILFSAGSLLPQTEDFKYLVYVSLAAVLLANVVF
HHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEE
IKWSSRQGVVTSGAAEPVES
EEECCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA