Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523499

Identifier: 42523499

GI number: 42523499

Start: 1933609

End: 1933941

Strand: Direct

Name: 42523499

Synonym: Bd2024

Alternate gene names: NA

Gene position: 1933609-1933941 (Clockwise)

Preceding gene: 42523494

Following gene: 42523501

Centisome position: 51.11

GC content: 48.95

Gene sequence:

>333_bases
ATGAAGAAGCAAGTAGTTATCGCCGTAATGACCCTGATCCCAGCAATCAGTTTTGCCAAGATCTCGGATTTCAACGCTTT
GATCAGCGAGAATTCCAAGGCGCAAAACGAGCTTCATAATACGGTTCAACACAACCTGGAAGCGTCCCGCGAACAAGCCG
CAGCGGCGGAAGTGCGCGAGCGTATCGTGGTGGTGGAAAACTCCGGCTCTTCTTATAATGCTCCAACTAAAAAAGACCTT
TTGGCCTTCAAAAAGGAAAAGATCAGCCACCGCGCTTCGGAAGAAAAGCAGTTTGACCGCTTGGCTTCTGAAATCCGCGG
TATGGAAGAGTAA

Upstream 100 bases:

>100_bases
GTAAGGGGCTTTTGCGGCGGAGCGACCTCTAAAGCAATAGAATCGCTGCCCGGGTGGCATCCCCCTTGCTTTATAAGTCT
GTATCAGCAAGGAGCTAAGT

Downstream 100 bases:

>100_bases
TTAAAGAATCAACTTACGTAGCTCTTGCTGAGAATATACGTAATCTGCATAAACCATGGTGTTGGTGATGTTTCGATGTC
CCAACGCCACCTGGACCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKQVVIAVMTLIPAISFAKISDFNALISENSKAQNELHNTVQHNLEASREQAAAAEVRERIVVVENSGSSYNAPTKKDL
LAFKKEKISHRASEEKQFDRLASEIRGMEE

Sequences:

>Translated_110_residues
MKKQVVIAVMTLIPAISFAKISDFNALISENSKAQNELHNTVQHNLEASREQAAAAEVRERIVVVENSGSSYNAPTKKDL
LAFKKEKISHRASEEKQFDRLASEIRGMEE
>Mature_110_residues
MKKQVVIAVMTLIPAISFAKISDFNALISENSKAQNELHNTVQHNLEASREQAAAAEVRERIVVVENSGSSYNAPTKKDL
LAFKKEKISHRASEEKQFDRLASEIRGMEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12312; Mature: 12312

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQVVIAVMTLIPAISFAKISDFNALISENSKAQNELHNTVQHNLEASREQAAAAEVRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVVVENSGSSYNAPTKKDLLAFKKEKISHRASEEKQFDRLASEIRGMEE
HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKQVVIAVMTLIPAISFAKISDFNALISENSKAQNELHNTVQHNLEASREQAAAAEVRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVVVENSGSSYNAPTKKDLLAFKKEKISHRASEEKQFDRLASEIRGMEE
HEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA