| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is yceI [C]
Identifier: 42523477
GI number: 42523477
Start: 1915621
End: 1916211
Strand: Direct
Name: yceI [C]
Synonym: Bd2001
Alternate gene names: 42523477
Gene position: 1915621-1916211 (Clockwise)
Preceding gene: 42523474
Following gene: 42523479
Centisome position: 50.64
GC content: 46.02
Gene sequence:
>591_bases ATGCTTAAAACTGTTTTTGCTGCGTTCGTATTTGTAGTTGCTGCTCATGCACAAGCGGCTGATGTTTATAAAATTGATAC CAAGGCCAGCACTGTGGCATGGAAAGGCACCAAGAAAGTGGGCGACTCCCACAATGGTGGTATCTCCGTGAAAGAAGGCC AAGTGACTGTCGATAAAGGTCAGTTGACTGGTGGTAGCGTGGTTGTTGACATGACTACAATCACAAACGAAGACGTGAAA GATGCGGGTTATAACAAAAAGCTGGTAGGTCACTTGTCCACTGAAGATTTCTTCAACGCCGGCAAGTTCCCCACGTCCAC TTTCAAGATCACGTCCGTGGCTCCATCCAAAAACAAAGGTGAAGTTCTGGTGAAAGGTGATTTCACAATGATCGGTGGCA CACACCCTATTGAGTTCCCTGCAAAAGTGACTGTTGATAAAGGTGTTGCAACGGGTGAAGCTGTTGTGAAAATCGACCGC ACCAAATGGGGTCTGAAATACGGTTCTGGCAACTTCTTCAAAGAACTTGCGGGTGACAAAATCATCAACGACGAGTTCGA GCTGACATTGAAACTTGTTGCGAAGAAATAG
Upstream 100 bases:
>100_bases GAGGTTTTCTTTTCTGTATTGATCTCTGTTACATTATGCGGGAAAGTTTTGATGGTTAACAGTGATGTTAAATAACGGGA ATTGCGAAGGAGAAAATGCA
Downstream 100 bases:
>100_bases TTTTTTCCAAAAAGAAAAACGAAAAAAAGGCATCACGAAAACCCGTGATGCCTTTTTTTATTAGTTGAACACGTACTGGC CCTCGTGATTGCGTGGCAGG
Product: YCE I like family protein
Products: NA
Alternate protein names: Ycei Family Protein; YCE I Like Family Protein; YceI Like Family Protein; Membrane Or Secreted YceI-Like Family Protein; Two Component Regulator Propeller Domain Protein; Rhodanese-Like Domain Protein; Rhodanese Domain-Containing Protein; Rhodanese-Like Domain-Containing Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLKTVFAAFVFVVAAHAQAADVYKIDTKASTVAWKGTKKVGDSHNGGISVKEGQVTVDKGQLTGGSVVVDMTTITNEDVK DAGYNKKLVGHLSTEDFFNAGKFPTSTFKITSVAPSKNKGEVLVKGDFTMIGGTHPIEFPAKVTVDKGVATGEAVVKIDR TKWGLKYGSGNFFKELAGDKIINDEFELTLKLVAKK
Sequences:
>Translated_196_residues MLKTVFAAFVFVVAAHAQAADVYKIDTKASTVAWKGTKKVGDSHNGGISVKEGQVTVDKGQLTGGSVVVDMTTITNEDVK DAGYNKKLVGHLSTEDFFNAGKFPTSTFKITSVAPSKNKGEVLVKGDFTMIGGTHPIEFPAKVTVDKGVATGEAVVKIDR TKWGLKYGSGNFFKELAGDKIINDEFELTLKLVAKK >Mature_196_residues MLKTVFAAFVFVVAAHAQAADVYKIDTKASTVAWKGTKKVGDSHNGGISVKEGQVTVDKGQLTGGSVVVDMTTITNEDVK DAGYNKKLVGHLSTEDFFNAGKFPTSTFKITSVAPSKNKGEVLVKGDFTMIGGTHPIEFPAKVTVDKGVATGEAVVKIDR TKWGLKYGSGNFFKELAGDKIINDEFELTLKLVAKK
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20947; Mature: 20947
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTVFAAFVFVVAAHAQAADVYKIDTKASTVAWKGTKKVGDSHNGGISVKEGQVTVDKG CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCEEEEECC QLTGGSVVVDMTTITNEDVKDAGYNKKLVGHLSTEDFFNAGKFPTSTFKITSVAPSKNKG CCCCCEEEEEEEECCCCCCHHCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEECCCCCCC EVLVKGDFTMIGGTHPIEFPAKVTVDKGVATGEAVVKIDRTKWGLKYGSGNFFKELAGDK CEEEECCEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCEECEEECCCCHHHHHCCCC IINDEFELTLKLVAKK EECCCCEEEEEEEECC >Mature Secondary Structure MLKTVFAAFVFVVAAHAQAADVYKIDTKASTVAWKGTKKVGDSHNGGISVKEGQVTVDKG CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCEEEECCEEEEECC QLTGGSVVVDMTTITNEDVKDAGYNKKLVGHLSTEDFFNAGKFPTSTFKITSVAPSKNKG CCCCCEEEEEEEECCCCCCHHCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEECCCCCCC EVLVKGDFTMIGGTHPIEFPAKVTVDKGVATGEAVVKIDRTKWGLKYGSGNFFKELAGDK CEEEECCEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCEECEEECCCCHHHHHCCCC IINDEFELTLKLVAKK EECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA