| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is kup
Identifier: 42523474
GI number: 42523474
Start: 1912073
End: 1914082
Strand: Direct
Name: kup
Synonym: Bd1998
Alternate gene names: 42523474
Gene position: 1912073-1914082 (Clockwise)
Preceding gene: 42523473
Following gene: 42523477
Centisome position: 50.54
GC content: 50.85
Gene sequence:
>2010_bases ATGTGGGCAAGATGCGTCAATCTTGCATGGGGACTGCTGACATCACGGATGAACTTAACTAGACTAAAACCTTGTTTCGA CAACTTAGACGGGGTTTTTGGTATCGAAAATTCAGGCCATCACAAAAATAGTTCCAATGTTTTAATGCTCGCATTAGGCG CCCTTGGTGTGGTGTTCGGCGATATCGGTACAAGTCCTCTGTATGCATTGAAAGAGTGTTTCGGTCACTATGGTTTGGCG CCCACGCCAGAAAACGTGATCGGAATATTGTCTTTGATCTTCTGGACGCTGGTTCTTGCCATCTGTATCAAGTACATGGC GTTTGTCTTAAGAGCAGACAATAAAGGTGAGGGGGGGATTCTTTCCCTGATGGCTCTGGCTGTGCGCAGTCAGCAGTCCA AGGATGTTTCGCGCCGGCGCTGGACCATGACGATCATCGGTCTGTTTGGAGCGGCCTTGCTTTATGGTGACGGTATTATC ACTCCGGCGATCTCAGTGCTTTCGGCGATGGAAGGTCTCACCTTGGTCGCTCCACAGTTTAGTCCTTACATTATTCCTCT GACTATTTTTGTGATGAACGCCCTCTTTCTGATGCAAAAGTACGGCACGGCTCGTATCGGCGTTATCTTCGGTCCGATTC TTCTGATTTGGTTCACTGTTCTGGGCTTGTTGGGTATTCGCGGGATGGCGAAAAACCTGCATGTCTTTGAAGCTCTGCTG CCACATCATGGGATTGAGTTCCTGATGAACAATGGGATGGCGGGTTTCCTGGTGCTGGGGTCGGTGTTTCTGGTTGTGAC CGGAGGCGAGGCCTTGTATGCGGACATGGGGCATTTTGGTAAACGACCAATTCGTCTGGCGTGGTTCTTTGTTGCTTTAC CAGCCTTGGTATTAAACTACTTCGGTCAAGGGGCTTTGCTGCTGAACAATCCTGAGGCTGTATCCAATCCTTTCTATATG CTGGCGCCAAAATGGGCTCTGCTTCCGATGGTCATGCTTTCTACGATGGCCACGGTTATCGCATCCCAGGCGTTGATCAC CGGGGTGTTTTCCATCACTCGTCAGGCAATCCAACTGGGTTTCTGTCCGCGCGTGAACATCATTCACACTTCCAGTCAGG AGATCGGTCAGATCTACATTCCAATTGTGAACTGGTCCATGTTCATCGGTGTGATCTGGCTGGTGTTGACATTTAAGACC TCCAGCAATCTGGCGGCAGCCTATGGAATTGCTGTGACTGGTGCGACGATGATCACCACAATCCTGGCGTTTGAAGTGGC TCGTCAAAAATGGAAATGGAGTCTGCTGAAGTCTTCGGCCATTTTTGGCAGCTTCCTGGTGATGGATCTGGCCTTCTTTG GTGCCAACGTTCATAAGATCCCGCATGGGGGCTGGGTGCCGTTGGTTATTGGGGCGATCATTTACCTGTTGATGACGACC TGGCAAAAGGGCCGTCAGATTTTGTTCCGACGTCTTAAAGAACGCTCCATGCCTATTGAAGACTTCTGCCAGAAGCTTCT GCGTGAGCCTCCACTGCGAGCTCCGGGCACGGCGATATATATGGCCGGTGACCCTTGGGGTGTTCCAGCACCGCTGCTGC ATAATATGAAGCACAACAAGGTTCTGCATCAGCGCGTGGCGATCCTGACGATTCAGACCAAAGAAGTGCCGTTTGTTTCC AAGCGCGATCGCATTTCCATTCAGGAAGTGATTCCGAATATCTACCGCATTATCGCCAACTATGGCTTTATGGAAATCCC CAAGATGAAACATATTCTTGAGGCCTGCCGTCAGCGCGATATCAACTTTAACGTGAATGAAACCACGTTCGTGCTGGGAC GCGAAACCATCATCGCGGAAAAAGGACCGAATCGTCCGGGCGAAGCAGGGATGGCACACTGGCGTGAACGTCTGTTTGCC ATCATGTCCAAGAATGCCCAGCGACCGACGGCGTTCTTCCGCATCCCGCCGAATCAGGTGATCGAAGTGGGAATTCAGGT CGAGATCTAG
Upstream 100 bases:
>100_bases AAGAGGGCTGCCAAAAACCATTTCGAGCGAAAAAGTGCATTCCGTGCCATAGATCTATGGTCTCAAAGAGCCTAAAATAA AGGCAACTGAACTTCGTGTA
Downstream 100 bases:
>100_bases TCATCATGGAGCAGGCGAACAACCTGCTCCCGGACATTGATGCCATCCTTGTATCCAATTTCTATCAGATCTGCCGAATA GGATTTTTCAAACAACAGAA
Product: KUP system, potassium uptake transmembrane protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MWARCVNLAWGLLTSRMNLTRLKPCFDNLDGVFGIENSGHHKNSSNVLMLALGALGVVFGDIGTSPLYALKECFGHYGLA PTPENVIGILSLIFWTLVLAICIKYMAFVLRADNKGEGGILSLMALAVRSQQSKDVSRRRWTMTIIGLFGAALLYGDGII TPAISVLSAMEGLTLVAPQFSPYIIPLTIFVMNALFLMQKYGTARIGVIFGPILLIWFTVLGLLGIRGMAKNLHVFEALL PHHGIEFLMNNGMAGFLVLGSVFLVVTGGEALYADMGHFGKRPIRLAWFFVALPALVLNYFGQGALLLNNPEAVSNPFYM LAPKWALLPMVMLSTMATVIASQALITGVFSITRQAIQLGFCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKT SSNLAAAYGIAVTGATMITTILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTT WQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNKVLHQRVAILTIQTKEVPFVS KRDRISIQEVIPNIYRIIANYGFMEIPKMKHILEACRQRDINFNVNETTFVLGRETIIAEKGPNRPGEAGMAHWRERLFA IMSKNAQRPTAFFRIPPNQVIEVGIQVEI
Sequences:
>Translated_669_residues MWARCVNLAWGLLTSRMNLTRLKPCFDNLDGVFGIENSGHHKNSSNVLMLALGALGVVFGDIGTSPLYALKECFGHYGLA PTPENVIGILSLIFWTLVLAICIKYMAFVLRADNKGEGGILSLMALAVRSQQSKDVSRRRWTMTIIGLFGAALLYGDGII TPAISVLSAMEGLTLVAPQFSPYIIPLTIFVMNALFLMQKYGTARIGVIFGPILLIWFTVLGLLGIRGMAKNLHVFEALL PHHGIEFLMNNGMAGFLVLGSVFLVVTGGEALYADMGHFGKRPIRLAWFFVALPALVLNYFGQGALLLNNPEAVSNPFYM LAPKWALLPMVMLSTMATVIASQALITGVFSITRQAIQLGFCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKT SSNLAAAYGIAVTGATMITTILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTT WQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNKVLHQRVAILTIQTKEVPFVS KRDRISIQEVIPNIYRIIANYGFMEIPKMKHILEACRQRDINFNVNETTFVLGRETIIAEKGPNRPGEAGMAHWRERLFA IMSKNAQRPTAFFRIPPNQVIEVGIQVEI >Mature_669_residues MWARCVNLAWGLLTSRMNLTRLKPCFDNLDGVFGIENSGHHKNSSNVLMLALGALGVVFGDIGTSPLYALKECFGHYGLA PTPENVIGILSLIFWTLVLAICIKYMAFVLRADNKGEGGILSLMALAVRSQQSKDVSRRRWTMTIIGLFGAALLYGDGII TPAISVLSAMEGLTLVAPQFSPYIIPLTIFVMNALFLMQKYGTARIGVIFGPILLIWFTVLGLLGIRGMAKNLHVFEALL PHHGIEFLMNNGMAGFLVLGSVFLVVTGGEALYADMGHFGKRPIRLAWFFVALPALVLNYFGQGALLLNNPEAVSNPFYM LAPKWALLPMVMLSTMATVIASQALITGVFSITRQAIQLGFCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKT SSNLAAAYGIAVTGATMITTILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTT WQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNKVLHQRVAILTIQTKEVPFVS KRDRISIQEVIPNIYRIIANYGFMEIPKMKHILEACRQRDINFNVNETTFVLGRETIIAEKGPNRPGEAGMAHWRERLFA IMSKNAQRPTAFFRIPPNQVIEVGIQVEI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=629, Percent_Identity=48.0127186009539, Blast_Score=623, Evalue=1e-179,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_BDEBA (Q6MLL0)
Other databases:
- EMBL: BX842651 - RefSeq: NP_968854.1 - GeneID: 2734710 - GenomeReviews: BX842601_GR - KEGG: bba:Bd1998 - NMPDR: fig|264462.1.peg.1825 - HOGENOM: HBG351154 - OMA: NGIESAN - PhylomeDB: Q6MLL0 - BioCyc: BBAC264462:BD1998-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 74255; Mature: 74255
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd74dbd0)-; HASH(0xf3881ec)-; HASH(0xde247fc)-; HASH(0xcde9c48)-; HASH(0xf7a477c)-; HASH(0xf869584)-; HASH(0xf00f108)-; HASH(0xf1a197c)-; HASH(0xf984058)-; HASH(0xf75867c)-; HASH(0xdfb5bdc)-; HASH(0xfaa0d10)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWARCVNLAWGLLTSRMNLTRLKPCFDNLDGVFGIENSGHHKNSSNVLMLALGALGVVFG CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHH DIGTSPLYALKECFGHYGLAPTPENVIGILSLIFWTLVLAICIKYMAFVLRADNKGEGGI CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LSLMALAVRSQQSKDVSRRRWTMTIIGLFGAALLYGDGIITPAISVLSAMEGLTLVAPQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCC SPYIIPLTIFVMNALFLMQKYGTARIGVIFGPILLIWFTVLGLLGIRGMAKNLHVFEALL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHHGIEFLMNNGMAGFLVLGSVFLVVTGGEALYADMGHFGKRPIRLAWFFVALPALVLNY CCCCHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FGQGALLLNNPEAVSNPFYMLAPKWALLPMVMLSTMATVIASQALITGVFSITRQAIQLG CCCCEEEECCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKTSSNLAAAYGIAVTGATMITT CCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH WQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNK HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCHHHH VLHQRVAILTIQTKEVPFVSKRDRISIQEVIPNIYRIIANYGFMEIPKMKHILEACRQRD HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC INFNVNETTFVLGRETIIAEKGPNRPGEAGMAHWRERLFAIMSKNAQRPTAFFRIPPNQV CCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH IEVGIQVEI EEEEEEEEH >Mature Secondary Structure MWARCVNLAWGLLTSRMNLTRLKPCFDNLDGVFGIENSGHHKNSSNVLMLALGALGVVFG CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHH DIGTSPLYALKECFGHYGLAPTPENVIGILSLIFWTLVLAICIKYMAFVLRADNKGEGGI CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LSLMALAVRSQQSKDVSRRRWTMTIIGLFGAALLYGDGIITPAISVLSAMEGLTLVAPQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCC SPYIIPLTIFVMNALFLMQKYGTARIGVIFGPILLIWFTVLGLLGIRGMAKNLHVFEALL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHHGIEFLMNNGMAGFLVLGSVFLVVTGGEALYADMGHFGKRPIRLAWFFVALPALVLNY CCCCHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FGQGALLLNNPEAVSNPFYMLAPKWALLPMVMLSTMATVIASQALITGVFSITRQAIQLG CCCCEEEECCCHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FCPRVNIIHTSSQEIGQIYIPIVNWSMFIGVIWLVLTFKTSSNLAAAYGIAVTGATMITT CCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH ILAFEVARQKWKWSLLKSSAIFGSFLVMDLAFFGANVHKIPHGGWVPLVIGAIIYLLMTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHH WQKGRQILFRRLKERSMPIEDFCQKLLREPPLRAPGTAIYMAGDPWGVPAPLLHNMKHNK HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCHHHH VLHQRVAILTIQTKEVPFVSKRDRISIQEVIPNIYRIIANYGFMEIPKMKHILEACRQRD HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC INFNVNETTFVLGRETIIAEKGPNRPGEAGMAHWRERLFAIMSKNAQRPTAFFRIPPNQV CCCCCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHH IEVGIQVEI EEEEEEEEH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA