Click here to switch to the map view.

The map label for this gene is 42523464

Identifier: 42523464

GI number: 42523464

Start: 1899122

End: 1899835

Strand: Direct

Name: 42523464

Synonym: Bd1987

Alternate gene names: NA

Gene position: 1899122-1899835 (Clockwise)

Preceding gene: 42523463

Following gene: 42523468

Centisome position: 50.2

GC content: 50.14

Gene sequence:

>714_bases
ATGTCTTTGTTTGCGCACGTAACAGCTTTGCTGATTTTGACGTCGGTGGCATCGGCCAAGCCGATAGTTCTGGCGACGTT
CGCCATTCCCTTGATGGTGGAAAGTCCCGAGCGCGGACTTTTTGTGAATCTCACCCGCGAAATCGCGAAACGCAATTCCC
GACAGATTGAGATCCTGGTTTATCCCACGGGGAAAACCCTTTTGGCATTTTCCAACAATAAAGTCGACGGTTTCTTCCCG
GCTCTGGATGTGTATGTCCCCCAGGCCACGGCCAAATCCACCGCTTTCTATCGTAAGGTGGACTATGTCTTTTACAAAAA
GGACAAACCCCTGAGAAGCCTCAAAGATCTTGAAGGCAAAAAGGTCGGTCTGACCTTCCGCTATCCTTATGTCAGAGAGC
TCATCGGCAATAAAAAGATCCGCTTTGAAATGGCGGCCGACGATGTGCTGAATATGAAAAAGTTGGGCAAGGGACTGATT
GATGCTTTTGTCGTGGAAGAGCGTTCAGGGTTGAAGGCACTGCAACTCAGCGGACAGAAGCAGATTGAGTTTGATCGAAA
CCAGCCTCTGTCAGAGCAGGTCGTGTACTATGCGTTTCAGGACAACGAAGACGGCAAACGTCTTGCCGATATTTTTTCTA
GGACCATTGAGTCCATGAAAAAAGACGGCAGCCTCGATCGGGTCCTGACTGAGACCGCCACCACCCCACCTTAG

Upstream 100 bases:

>100_bases
AAACGCAACTCCACTTTGGGTCTTAAAAGCATCTAAATTTGTAACGTTACCCGGGTTGAAAAGACCTTGCTAAATACCAT
CAATAAATCTTTACTTAGTT

Downstream 100 bases:

>100_bases
CTATTCCACAGTTCCCAGACGGATCTCGGCATCAAGGACAATGTACAATTGTGCCTCTTCGCCCAAACTCCACTGCAAAT
CATAGAGTTCACTTTGGCGA

Product: amino acid ABC transporter, periplasmic

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSLFAHVTALLILTSVASAKPIVLATFAIPLMVESPERGLFVNLTREIAKRNSRQIEILVYPTGKTLLAFSNNKVDGFFP
ALDVYVPQATAKSTAFYRKVDYVFYKKDKPLRSLKDLEGKKVGLTFRYPYVRELIGNKKIRFEMAADDVLNMKKLGKGLI
DAFVVEERSGLKALQLSGQKQIEFDRNQPLSEQVVYYAFQDNEDGKRLADIFSRTIESMKKDGSLDRVLTETATTPP

Sequences:

>Translated_237_residues
MSLFAHVTALLILTSVASAKPIVLATFAIPLMVESPERGLFVNLTREIAKRNSRQIEILVYPTGKTLLAFSNNKVDGFFP
ALDVYVPQATAKSTAFYRKVDYVFYKKDKPLRSLKDLEGKKVGLTFRYPYVRELIGNKKIRFEMAADDVLNMKKLGKGLI
DAFVVEERSGLKALQLSGQKQIEFDRNQPLSEQVVYYAFQDNEDGKRLADIFSRTIESMKKDGSLDRVLTETATTPP
>Mature_236_residues
SLFAHVTALLILTSVASAKPIVLATFAIPLMVESPERGLFVNLTREIAKRNSRQIEILVYPTGKTLLAFSNNKVDGFFPA
LDVYVPQATAKSTAFYRKVDYVFYKKDKPLRSLKDLEGKKVGLTFRYPYVRELIGNKKIRFEMAADDVLNMKKLGKGLID
AFVVEERSGLKALQLSGQKQIEFDRNQPLSEQVVYYAFQDNEDGKRLADIFSRTIESMKKDGSLDRVLTETATTPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26738; Mature: 26607

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFAHVTALLILTSVASAKPIVLATFAIPLMVESPERGLFVNLTREIAKRNSRQIEILV
CCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHHHCCCCCEEEEEE
YPTGKTLLAFSNNKVDGFFPALDVYVPQATAKSTAFYRKVDYVFYKKDKPLRSLKDLEGK
EECCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCC
KVGLTFRYPYVRELIGNKKIRFEMAADDVLNMKKLGKGLIDAFVVEERSGLKALQLSGQK
EEEEEEECHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
QIEFDRNQPLSEQVVYYAFQDNEDGKRLADIFSRTIESMKKDGSLDRVLTETATTPP
EEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
SLFAHVTALLILTSVASAKPIVLATFAIPLMVESPERGLFVNLTREIAKRNSRQIEILV
CHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEEEEHHHHHCCCCCEEEEEE
YPTGKTLLAFSNNKVDGFFPALDVYVPQATAKSTAFYRKVDYVFYKKDKPLRSLKDLEGK
EECCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHEEEEEEECCCCHHHHHHCCCC
KVGLTFRYPYVRELIGNKKIRFEMAADDVLNMKKLGKGLIDAFVVEERSGLKALQLSGQK
EEEEEEECHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
QIEFDRNQPLSEQVVYYAFQDNEDGKRLADIFSRTIESMKKDGSLDRVLTETATTPP
EEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA