Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523403

Identifier: 42523403

GI number: 42523403

Start: 1837494

End: 1837754

Strand: Direct

Name: 42523403

Synonym: Bd1925

Alternate gene names: NA

Gene position: 1837494-1837754 (Clockwise)

Preceding gene: 42523402

Following gene: 42523404

Centisome position: 48.57

GC content: 51.34

Gene sequence:

>261_bases
TTGAGACGGACTTCTGCCGAAGAGTTCAGCATGGAACAACTTATTCTTAGTCTGATCTCTGTCGTTTTATTCTGCCTTTG
CTGTCACCAGTTCATTCGCACGATGGTAAAGCCCATTCCCATGCTGGCGTCGGAAAGACCCTATGCCCGGGGTGCCATGC
AGCTTGGCAAGTTCTATAAGTCAGTGGCCTGGGGGACGATGACCATGGCGTTTCTGGGCGGCCTTGTGGTTTCCTTCCAG
CAGGTTTTTCTGACTTTGTAG

Upstream 100 bases:

>100_bases
AAATCACTGCCGAAATCGATATCATCAAAAAGGATGCATCGTCCTCCAAAGACGAATCCGACGAAAAAGCCTAAAATACA
AGCCCAAGGTCTGTCTCAAG

Downstream 100 bases:

>100_bases
TTTGCACCTTTGATGCGCCGAGAGAGGCGCATCTTTCACTCTTGTGGCAGCCTTGAATTTTCGGAGGTTGTCATGAGCGC
TTTTAAAACCGTCAATCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRRTSAEEFSMEQLILSLISVVLFCLCCHQFIRTMVKPIPMLASERPYARGAMQLGKFYKSVAWGTMTMAFLGGLVVSFQ
QVFLTL

Sequences:

>Translated_86_residues
MRRTSAEEFSMEQLILSLISVVLFCLCCHQFIRTMVKPIPMLASERPYARGAMQLGKFYKSVAWGTMTMAFLGGLVVSFQ
QVFLTL
>Mature_86_residues
MRRTSAEEFSMEQLILSLISVVLFCLCCHQFIRTMVKPIPMLASERPYARGAMQLGKFYKSVAWGTMTMAFLGGLVVSFQ
QVFLTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9758; Mature: 9758

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTSAEEFSMEQLILSLISVVLFCLCCHQFIRTMVKPIPMLASERPYARGAMQLGKFYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SVAWGTMTMAFLGGLVVSFQQVFLTL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRTSAEEFSMEQLILSLISVVLFCLCCHQFIRTMVKPIPMLASERPYARGAMQLGKFYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SVAWGTMTMAFLGGLVVSFQQVFLTL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA