| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523402
Identifier: 42523402
GI number: 42523402
Start: 1837090
End: 1837467
Strand: Direct
Name: 42523402
Synonym: Bd1924
Alternate gene names: NA
Gene position: 1837090-1837467 (Clockwise)
Preceding gene: 42523401
Following gene: 42523403
Centisome position: 48.56
GC content: 47.62
Gene sequence:
>378_bases ATGGCAACTGATGGAAGCAAAAAAGACGACAAGGACAATTCGGGGGACCTGAAAGGTCTTCTGGGTGACACGGTAAAAAA GGTTTTCACCGCCGGTGTCAGCGCGGCGTTCATGACCGAAGAAAGCCTGCGGGCCTATGTCTCTGAGTTGAAGCTTCCCA AAGAAGCCTTGAATTTGCTGATTCAAGGGGCGCAAAAATCCAAGGACGAAGTCACTCAACGGGTGACCAAAGAGATCGTC GGGATCATACAGAAAATTGACTTTGTCAAAGAGGCCTCCAAATTCGCAGAGACCCACAAATTCAAAATCACTGCCGAAAT CGATATCATCAAAAAGGATGCATCGTCCTCCAAAGACGAATCCGACGAAAAAGCCTAA
Upstream 100 bases:
>100_bases ACCTTCAGCATGTTTGTTCCGGGTCCGATTGCCAATGCCCTGGTCAGTGTGAATCTTCCGAATATGATCAGCAGCTATCA CAAGCGAGTGAAACAACTTT
Downstream 100 bases:
>100_bases AATACAAGCCCAAGGTCTGTCTCAAGTTGAGACGGACTTCTGCCGAAGAGTTCAGCATGGAACAACTTATTCTTAGTCTG ATCTCTGTCGTTTTATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MATDGSKKDDKDNSGDLKGLLGDTVKKVFTAGVSAAFMTEESLRAYVSELKLPKEALNLLIQGAQKSKDEVTQRVTKEIV GIIQKIDFVKEASKFAETHKFKITAEIDIIKKDASSSKDESDEKA
Sequences:
>Translated_125_residues MATDGSKKDDKDNSGDLKGLLGDTVKKVFTAGVSAAFMTEESLRAYVSELKLPKEALNLLIQGAQKSKDEVTQRVTKEIV GIIQKIDFVKEASKFAETHKFKITAEIDIIKKDASSSKDESDEKA >Mature_124_residues ATDGSKKDDKDNSGDLKGLLGDTVKKVFTAGVSAAFMTEESLRAYVSELKLPKEALNLLIQGAQKSKDEVTQRVTKEIVG IIQKIDFVKEASKFAETHKFKITAEIDIIKKDASSSKDESDEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13681; Mature: 13549
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDGSKKDDKDNSGDLKGLLGDTVKKVFTAGVSAAFMTEESLRAYVSELKLPKEALNLL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IQGAQKSKDEVTQRVTKEIVGIIQKIDFVKEASKFAETHKFKITAEIDIIKKDASSSKDE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCCCC SDEKA CCCCC >Mature Secondary Structure ATDGSKKDDKDNSGDLKGLLGDTVKKVFTAGVSAAFMTEESLRAYVSELKLPKEALNLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH IQGAQKSKDEVTQRVTKEIVGIIQKIDFVKEASKFAETHKFKITAEIDIIKKDASSSKDE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCCCC SDEKA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA