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The map label for this gene is 42523393

Identifier: 42523393

GI number: 42523393

Start: 1829447

End: 1830760

Strand: Direct

Name: 42523393

Synonym: Bd1915

Alternate gene names: NA

Gene position: 1829447-1830760 (Clockwise)

Preceding gene: 42523390

Following gene: 42523396

Centisome position: 48.36

GC content: 52.36

Gene sequence:

>1314_bases
ATGCGCCATAGGTACTTTTTTAAAGCCCTTGTTATATTTTTGTTGGGAGTCCCGGTCCGGACTCAGGCTGCGGGACTCTA
TCTGCAGGATGCTGTGAATGAAGCCCTTTTAAATTCACCCAAAGTGCAAAAATCCGAATCTCAGTTCCGCGAATCCAGCT
GGAAAAAGACCGAGTCCTATTCTGGCTTTTTGCCGACACTCTCGGCTCAGGCCAGTTACCTCTTTGACAAGAAATATGCG
CTGATCGATGTGAATATGAACGGGGTCCCTTTGGAAATCCCCCAGGTGGTCCCGACCACGAATCTCTATTTGACTGCGCA
GTGGTCCGTCTTTGATGGGTTTGCCAGCACCAACCGCTATCTCAGTGCCGAGGCGTTTCAGGAGTCGGCAAAAAATGAAT
TTGACTGGGTCCGCTTTCAGATCCAGCGCGAAGTGACGATGCTTTTCTATAAGGCTCTGGCTGCCAAAGAACTGCAAACC
GTGGCCGAGCAGAACGTGCGGGCTTTGGAGGATCATTTGAAAGATGTGCGCCTGTTTAAGAAAGTGGGCTCATCCACCGA
CTATGATGTTTTGCGCGTTGAAGTTCAGATGAGTGAGGCGCAGTCCGAACTTTTGCATGCCACAGACAATGTTGAACTTT
CCCGGGGACGCCTGAGTGAAGCTTTGGGCCGGGAGCAGGATGTCGCATGGGTGGAGGGCACTTTGCCGCGCTTAAGTCCG
GAGTTGGTGGCGAAGCTGGATAAGGCCACGCTTGAAGACCGCAAAGACTTGCAGGCTTTGCGCCAGCGCGCCGAGGGCTT
TAAGTACCAGGAAGATTCAGCGGAAAAGTTCTGGGTTCCGCGCATTGCTCTGATGGGGCAATACCAGTACTACAACAACC
GCGATGAACGTTTTGATGACTATGACCAGTTTCGGGATGCCTATCAGGTTGGTGTGACTTTGAACTGGAATCTGTTTGAT
GGAATGACCTCGATTTCACGTTCAAAGCAGAGTATCGAGCAGAAGTATCAGGCTGAAAAGACCCTTCGTCAGGCGCAGTT
AAAAAGCCAGCGGGATTTTGCTATGTGGAAGAAGCGGTTTCTGTATTTCTGTAAAGTGTATGAAGCCCGGCTGAATGACG
TTTCCAAATCAGAGGAAAGTGTCCGTCTGGCGCGGGAAGGGCGCAAGGCGGGGGCCCGAACCAACACGGATGTGCTGGAT
GCAGAGGCGGAACTTTATCGGGCCCGGGCGGGGGCGGTGAATGCCCAGGTGGGCGCCATTGAGGCGATCGTCAGCCTGGA
GCTTAGTACCGGTCAGCAACTGGTGAATTTTTAG

Upstream 100 bases:

>100_bases
AGGTCCAAAGTTTGAGTCCGGCGCAGATGTTTGCGTGCGAGCTGACAAAGGGATTTCTTGGCTCTTGGTCTTCACTGGAA
AATGACTTGTACTCAAGGGC

Downstream 100 bases:

>100_bases
CGAATGGCAGAAATAATTGTGGCGCTGGCGAATTGGATCGGGCTTTGCGGCTTACCGGAAGACAGCTTCACCCAGCTGCA
TAGAAGCAAAGCCAGGAAAA

Product: putative outer membrane secretion protein

Products: NA

Alternate protein names: Type I Secretion Outer Membrane Protein lC; Type I Secretion Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; Outer Membrane Protein; Outer Membrane Secretion Protein; Efflux System Outer Membrane Protein; Outer Membrane Protein-Like; LC Family Type I Secretion Outer Membrane Protein; RND Family Efflux Pump Outer Membrane Protein; RND Family Efflux Pump Inner Membrane Protein; Type I Secretion Outer Membrane Protein lC Family; Outer Membrane Protein CyaE; Outer Membrane Efflux Family Protein

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MRHRYFFKALVIFLLGVPVRTQAAGLYLQDAVNEALLNSPKVQKSESQFRESSWKKTESYSGFLPTLSAQASYLFDKKYA
LIDVNMNGVPLEIPQVVPTTNLYLTAQWSVFDGFASTNRYLSAEAFQESAKNEFDWVRFQIQREVTMLFYKALAAKELQT
VAEQNVRALEDHLKDVRLFKKVGSSTDYDVLRVEVQMSEAQSELLHATDNVELSRGRLSEALGREQDVAWVEGTLPRLSP
ELVAKLDKATLEDRKDLQALRQRAEGFKYQEDSAEKFWVPRIALMGQYQYYNNRDERFDDYDQFRDAYQVGVTLNWNLFD
GMTSISRSKQSIEQKYQAEKTLRQAQLKSQRDFAMWKKRFLYFCKVYEARLNDVSKSEESVRLAREGRKAGARTNTDVLD
AEAELYRARAGAVNAQVGAIEAIVSLELSTGQQLVNF

Sequences:

>Translated_437_residues
MRHRYFFKALVIFLLGVPVRTQAAGLYLQDAVNEALLNSPKVQKSESQFRESSWKKTESYSGFLPTLSAQASYLFDKKYA
LIDVNMNGVPLEIPQVVPTTNLYLTAQWSVFDGFASTNRYLSAEAFQESAKNEFDWVRFQIQREVTMLFYKALAAKELQT
VAEQNVRALEDHLKDVRLFKKVGSSTDYDVLRVEVQMSEAQSELLHATDNVELSRGRLSEALGREQDVAWVEGTLPRLSP
ELVAKLDKATLEDRKDLQALRQRAEGFKYQEDSAEKFWVPRIALMGQYQYYNNRDERFDDYDQFRDAYQVGVTLNWNLFD
GMTSISRSKQSIEQKYQAEKTLRQAQLKSQRDFAMWKKRFLYFCKVYEARLNDVSKSEESVRLAREGRKAGARTNTDVLD
AEAELYRARAGAVNAQVGAIEAIVSLELSTGQQLVNF
>Mature_437_residues
MRHRYFFKALVIFLLGVPVRTQAAGLYLQDAVNEALLNSPKVQKSESQFRESSWKKTESYSGFLPTLSAQASYLFDKKYA
LIDVNMNGVPLEIPQVVPTTNLYLTAQWSVFDGFASTNRYLSAEAFQESAKNEFDWVRFQIQREVTMLFYKALAAKELQT
VAEQNVRALEDHLKDVRLFKKVGSSTDYDVLRVEVQMSEAQSELLHATDNVELSRGRLSEALGREQDVAWVEGTLPRLSP
ELVAKLDKATLEDRKDLQALRQRAEGFKYQEDSAEKFWVPRIALMGQYQYYNNRDERFDDYDQFRDAYQVGVTLNWNLFD
GMTSISRSKQSIEQKYQAEKTLRQAQLKSQRDFAMWKKRFLYFCKVYEARLNDVSKSEESVRLAREGRKAGARTNTDVLD
AEAELYRARAGAVNAQVGAIEAIVSLELSTGQQLVNF

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50216; Mature: 50216

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHRYFFKALVIFLLGVPVRTQAAGLYLQDAVNEALLNSPKVQKSESQFRESSWKKTESY
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
SGFLPTLSAQASYLFDKKYALIDVNMNGVPLEIPQVVPTTNLYLTAQWSVFDGFASTNRY
CCCCCCHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCEEEEEEEHHHCCHHHCCCH
LSAEAFQESAKNEFDWVRFQIQREVTMLFYKALAAKELQTVAEQNVRALEDHLKDVRLFK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGSSTDYDVLRVEVQMSEAQSELLHATDNVELSRGRLSEALGREQDVAWVEGTLPRLSP
HHCCCCCCEEEEEEEEHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCHHHHCCCCCCCH
ELVAKLDKATLEDRKDLQALRQRAEGFKYQEDSAEKFWVPRIALMGQYQYYNNRDERFDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCH
YDQFRDAYQVGVTLNWNLFDGMTSISRSKQSIEQKYQAEKTLRQAQLKSQRDFAMWKKRF
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYFCKVYEARLNDVSKSEESVRLAREGRKAGARTNTDVLDAEAELYRARAGAVNAQVGAI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
EAIVSLELSTGQQLVNF
HHHHEEECCCCHHHHCC
>Mature Secondary Structure
MRHRYFFKALVIFLLGVPVRTQAAGLYLQDAVNEALLNSPKVQKSESQFRESSWKKTESY
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
SGFLPTLSAQASYLFDKKYALIDVNMNGVPLEIPQVVPTTNLYLTAQWSVFDGFASTNRY
CCCCCCHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCEEEEEEEHHHCCHHHCCCH
LSAEAFQESAKNEFDWVRFQIQREVTMLFYKALAAKELQTVAEQNVRALEDHLKDVRLFK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGSSTDYDVLRVEVQMSEAQSELLHATDNVELSRGRLSEALGREQDVAWVEGTLPRLSP
HHCCCCCCEEEEEEEEHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCCHHHHCCCCCCCH
ELVAKLDKATLEDRKDLQALRQRAEGFKYQEDSAEKFWVPRIALMGQYQYYNNRDERFDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCH
YDQFRDAYQVGVTLNWNLFDGMTSISRSKQSIEQKYQAEKTLRQAQLKSQRDFAMWKKRF
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYFCKVYEARLNDVSKSEESVRLAREGRKAGARTNTDVLDAEAELYRARAGAVNAQVGAI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
EAIVSLELSTGQQLVNF
HHHHEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA