Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 42523396

GI number: 42523396

Start: 1831526

End: 1831948

Strand: Direct

Name: ybgC [C]

Synonym: Bd1918

Alternate gene names: 42523396

Gene position: 1831526-1831948 (Clockwise)

Preceding gene: 42523393

Following gene: 42523397

Centisome position: 48.42

GC content: 47.04

Gene sequence:

>423_bases
ATGTTTATTCATCGCCACAAAGTGCAGTTTTACGAAACCGATCTTATGGGTATTGTTCATCACAGCAATTACCTCAGATT
TTATGAGGAAGCCCGCGTTGCCTGGGCCCATGCTCACGGTTTGTTGGATTACCAAAAGCCGGGTTCGGCGAGTCATTTTG
CGGTCTATGAAACTCAGGTAAAACATATGAAACCCACTTTCTTTGGGGACGACCTGGAGATTGAAGTGCAGGCGCGCTGC
GAAGGCAACCGACTGGTATTCCAGTACCGTCTGCATGGACGCGGTAATGAAGTGTGTTCTGTTGCAAAGACGGTTCACGT
CCCCCTGGGGTTGGATTTAAAACTACTAAGATTCCCGGCAGATATGAAAGCCATTGTGAATAAAGAATTGGAGAAAGAAG
CATGGATCGAAACCTGGCTTTAG

Upstream 100 bases:

>100_bases
GATTCTTGTTGGAAGATTCTTCTGAAATTCTGTTACTGCCACAAACTCTCCAATCGCTTCGCGCTGGACTAAAGGTAGCA
ATTTAGACTAGAAAGAATCA

Downstream 100 bases:

>100_bases
AATTCGTACGTGTGACCGAAGCAGCTGCTCTGGCTTCCGCCCGCTGGGTGGGACGCGGCGAGGAAAAACCTGCGGACGCA
GCAGCCGTGGACGCCATGAG

Product: putative esterase

Products: NA

Alternate protein names: Esterase

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MFIHRHKVQFYETDLMGIVHHSNYLRFYEEARVAWAHAHGLLDYQKPGSASHFAVYETQVKHMKPTFFGDDLEIEVQARC
EGNRLVFQYRLHGRGNEVCSVAKTVHVPLGLDLKLLRFPADMKAIVNKELEKEAWIETWL

Sequences:

>Translated_140_residues
MFIHRHKVQFYETDLMGIVHHSNYLRFYEEARVAWAHAHGLLDYQKPGSASHFAVYETQVKHMKPTFFGDDLEIEVQARC
EGNRLVFQYRLHGRGNEVCSVAKTVHVPLGLDLKLLRFPADMKAIVNKELEKEAWIETWL
>Mature_140_residues
MFIHRHKVQFYETDLMGIVHHSNYLRFYEEARVAWAHAHGLLDYQKPGSASHFAVYETQVKHMKPTFFGDDLEIEVQARC
EGNRLVFQYRLHGRGNEVCSVAKTVHVPLGLDLKLLRFPADMKAIVNKELEKEAWIETWL

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16396; Mature: 16396

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIHRHKVQFYETDLMGIVHHSNYLRFYEEARVAWAHAHGLLDYQKPGSASHFAVYETQV
CCEECCEEEEEECCCEEEEECCCHHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEEEEH
KHMKPTFFGDDLEIEVQARCEGNRLVFQYRLHGRGNEVCSVAKTVHVPLGLDLKLLRFPA
HHCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCHHEEEEHEEECCCCCCEEEEECCC
DMKAIVNKELEKEAWIETWL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIHRHKVQFYETDLMGIVHHSNYLRFYEEARVAWAHAHGLLDYQKPGSASHFAVYETQV
CCEECCEEEEEECCCEEEEECCCHHHHHHHHHHHEEHHCCCCCCCCCCCCCEEEEEEEEH
KHMKPTFFGDDLEIEVQARCEGNRLVFQYRLHGRGNEVCSVAKTVHVPLGLDLKLLRFPA
HHCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCHHEEEEHEEECCCCCCEEEEECCC
DMKAIVNKELEKEAWIETWL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA